Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02973 ATGAATACGACGCCGTTCATGGACAAGCAGATAATGGATCTCTCTCATGGATCTTCTCCGACGCAGAGCAACAAGGACTTCATCGACCTCATGAAACCCCAACACCAAGACGAAGAACCACAGCATCAACATCATCGAGCTGAAGAAGAAGAAGAAGGAGAAAGAGAAGAAGGGCGTGGCAATGGGATCAAAACCGACGATATCGTTCCCAGCTACGATTTCCAACCGATTCGCCCACTCCCCGCTTCCAATTACGATCCTGCCCCCAATTTCGTTTCCGCATTTTCCAGGCCTTGGAACTCTGATTCCAACTCCAACTCTTACCCTACCATCACCAAAAATTACAGTTCGCTGGATTCTATTGAACCTGTGAAGGTCAATGTAGAAAAGGACCGAAATGCTTTTGATGCTACAATTTTGTCTGAGATTGATCGAACTATGAAGAAACATATGGAAAATTTGCTTCATGTTGTGGAAGGTGTTAGTGCACGGTTAACACAACTAGAAACCAGAACACACCATCTTGAGAATTCAATGGATGATTTAAAGTTATCTGTTGGAAATAATCATGGTAACACTGATGGAAAATTGAGACAGATGGAAAATATTCTTCGAGAGGTGCAAACGGGGGTGCAAACTATCAAGGATAAGCAAGATATAGTGCAAGCTCAGCTGCAACTGGCAAAGCTACAAGTATCCACCAAGACGGATCAACAATCAGAAACTCAAACTAGTGTAGTTACAGATCCTGGGCAGCAAGCTGCATCTGCTCCCCTTCAATCTCAACAACAGCTTCCTTCCCCTGTTAATCTTCCGCAATCAATTCCTGTGGTTCCTCCCCCTAATGCGCCTCCTCAACCTGCCCCCCAACAGGTTTTGCCACCTGCAGTTCAACTTCCAAATCAATTCCCTCAGATCCCTACCCCAGCTGTTCCTCAGAGAGATCCATACTTCCCACCACCCATTCAATCTCAGGAAACTCCAAATCAGCAGTACCAACTTCCTTTAGCTCAGCAGCCACATCCTCAACCTGGCGCACCTCCACATCAACAATATCAACAAACCCCTCATCCCCAGTACTCTCAGCCAGCACCTCATCCTCCTCAACAGCAGCCATCGATTTCACCTGGAAATCTGCCTCAACTACAATCTTCACTAGGTCACCATGTAGAGGAACCACCTTATCCTCCTTCTCAGAATTATCCTCCTCCCAATCTACGCCAACCCCCATCTCAGCCACCCAGTGGACCTCCTCCTCCTTCTCAACAATTCTATGGGACACCACCCCATGCATATGAGCCTCAGCCACCATCGAGTAGAACTGGTTCGGGTTATTCTTCTGGATATGGTACATTATCTGGGCCTGCTGAGCCATATCGATATGGTGGATCACCTCAATATGGTGGTAAACCACCACAACTACCCACTGCTTCAGTGGCTCCAAGTGGTGGAAGTGGTTACCCACAGCTCCCAACTGCTCGGGTGCTCCCTCAAGCAATACCGACTGCATCTGCAGTAAGTGGTGGCTCAGGTTCTCCTGGAACTGGAAACAGGGTTTCTATTGATGATGTAGTTGACAAAGTTGCTACTATGGGATTCCCTAGAGACCATGTGAGGGCAACAGTTCGGAAGCTGACAGAGAATGGTCAATCAGTTGACCTAAATGCAGTGCTGGATAAGCTTATGAATGAAGGTGAAGTCCAACCACCAAGAGGTTGGTTTGGCCGGTAG 1731 0.4731 MNTTPFMDKQIMDLSHGSSPTQSNKDFIDLMKPQHQDEEPQHQHHRAEEEEEGEREEGRGNGIKTDDIVPSYDFQPIRPLPASNYDPAPNFVSAFSRPWNSDSNSNSYPTITKNYSSLDSIEPVKVNVEKDRNAFDATILSEIDRTMKKHMENLLHVVEGVSARLTQLETRTHHLENSMDDLKLSVGNNHGNTDGKLRQMENILREVQTGVQTIKDKQDIVQAQLQLAKLQVSTKTDQQSETQTSVVTDPGQQAASAPLQSQQQLPSPVNLPQSIPVVPPPNAPPQPAPQQVLPPAVQLPNQFPQIPTPAVPQRDPYFPPPIQSQETPNQQYQLPLAQQPHPQPGAPPHQQYQQTPHPQYSQPAPHPPQQQPSISPGNLPQLQSSLGHHVEEPPYPPSQNYPPPNLRQPPSQPPSGPPPPSQQFYGTPPHAYEPQPPSSRTGSGYSSGYGTLSGPAEPYRYGGSPQYGGKPPQLPTASVAPSGGSGYPQLPTARVLPQAIPTASAVSGGSGSPGTGNRVSIDDVVDKVATMGFPRDHVRATVRKLTENGQSVDLNAVLDKLMNEGEVQPPRGWFGR. 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02973 576 MobiDBLite consensus disorder prediction 233 271 - -
Seca10g02973 576 MobiDBLite consensus disorder prediction 324 338 - -
Seca10g02973 576 MobiDBLite consensus disorder prediction 1 29 - -
Seca10g02973 576 MobiDBLite consensus disorder prediction 1 71 - -
Seca10g02973 576 MobiDBLite consensus disorder prediction 360 374 - -
Seca10g02973 576 MobiDBLite consensus disorder prediction 395 435 - -
Seca10g02973 576 MobiDBLite consensus disorder prediction 436 450 - -
Seca10g02973 576 MobiDBLite consensus disorder prediction 233 491 - -
Seca10g02973 576 MobiDBLite consensus disorder prediction 272 323 - -
Seca10g02973 576 MobiDBLite consensus disorder prediction 30 63 - -
Seca10g02973 576 Pfam UBA-like domain (DUF1421) 521 564 IPR010820 -
Seca10g02973 576 PRINTS Proline rich extensin signature 361 377 - -
Seca10g02973 576 PRINTS Proline rich extensin signature 393 418 - -
Seca10g02973 576 PRINTS Proline rich extensin signature 309 321 - -
Seca10g02973 576 PRINTS Proline rich extensin signature 335 356 - -
Seca10g02973 576 PRINTS Proline rich extensin signature 273 289 - -
Seca10g02973 576 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02973 Seca-Chr10 39968329 39974680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02973 1 318 Trihelix Transcription Factor Family AT5G14540 44.785 1.56e-65 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02973 - - gmx:100777464 689.878