Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02940 ATGTCTCCTGATTCTCTCTCTTTGTTGGCCTCTGCGAACCTCAAAATGCAGAGCCTTTCTCTGTCACGTTCTCCTTCAACCCGCATAGCCATAGCCATAGCCAAGTTCCCTCTTCAACTCTCACACTCTCACCCTTTTTCTTTTTCACCACTCAGTTTCCCCATCAATGGACTTTCATACCCATCTTCTTCTTTGCTCCTCACTGCTCGAAAGCCTTCTCCTTTTCTCATTTCTACTCAAAAAATTGCATCTTTCAGAGTCCTTGCTGCTTCTGTGCCAGAGGCTAAAAGTGATGAGCCTAGTAAATCATCTGGGTTGACTCAGACTCTGCAGCTTGGGGTCATGTTTGCAACTTGGTACCTCTTGAATATTTACTTCAACATCTTCAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTCGCTACGTTGATGATTAATTTGATCTGGACTTTAAATCTCCATCCAAGACCAAATGTTAGTCGTTCACAGTTTGCATCAATCCTTCCACTGGCTTTGGCTCATACAATGGGGAACCTGTTAACTAACATTAGTCTTGGCAAGGTTGCTGTATCTTTTACTCACACAATCAAAGCTATGGAGCCTTTTTTCACTGTTGTTCTTTCTACCCTTTTTCTGGGTGAGATGCCTACTTTCTGGGTGGTTTCTTCCCTTTTACCAATAGTAGGGGGAGTGGCACTGGCATCAATGACTGAAGTCTCTTTCAATTGGTAA 762 0.4265 MSPDSLSLLASANLKMQSLSLSRSPSTRIAIAIAKFPLQLSHSHPFSFSPLSFPINGLSYPSSSLLLTARKPSPFLISTQKIASFRVLAASVPEAKSDEPSKSSGLTQTLQLGVMFATWYLLNIYFNIFNKQVLKVYPFPATVTAFQFGFATLMINLIWTLNLHPRPNVSRSQFASILPLALAHTMGNLLTNISLGKVAVSFTHTIKAMEPFFTVVLSTLFLGEMPTFWVVSSLLPIVGGVALASMTEVSFNW. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02940 253 PANTHER SOLUTE CARRIER FAMILY 35 111 253 - -
Seca10g02940 253 Pfam Triose-phosphate Transporter family 110 253 IPR004853 -
Seca10g02940 253 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02940 Seca-Chr10 39583081 39585054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02940 81 252 Antiporters AT3G01550 64.535 3.18e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02940 K15283 - gmx:100819280 344.354