Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02939 ATGGCATCTAACCTTACTAATCAATCACGGAATGTTTTGAGCAAAAAACTAATGGCCAATGAAGAGGAAGCTTTGGACAATATCAATCTCTACTCAGTTATAACCATCATTTCCTTTATCCTATTGGTCCCATGTGCTATACTTATGGAGGGTGTCAAGTTTACTCCTTCATACTTGCAATATGCTGCAAGCCAAGGATTGAATGTTAGAGAGCTATGTGTGAGATCAGTTTTGGCTGCGTTCTGCTTCCATGCATACCAACAGGTTTCTTATGGAATATTAGGGATGGTATCACCAGTGACCCACTCAGTTGGAAATTGTGTGAAGCGTGTGGTGGTCATAGTCTCTTCAGTTATCTTCTTCCAAACTCCTGTCTCACACGTTAACGCACTTGGAACTGCTATTGCACTTGTTGGAGTTTTCTTGTATTCAAGGGCAAAACGGATTAAGACAATGCCAAAGACAAATGCAGCATAA 477 0.4067 MASNLTNQSRNVLSKKLMANEEEALDNINLYSVITIISFILLVPCAILMEGVKFTPSYLQYAASQGLNVRELCVRSVLAAFCFHAYQQVSYGILGMVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSHVNALGTAIALVGVFLYSRAKRIKTMPKTNAA. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02939 158 PANTHER SOLUTE CARRIER FAMILY 35 1 148 - -
Seca10g02939 158 Pfam Triose-phosphate Transporter family 1 144 IPR004853 -
Seca10g02939 158 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02939 Seca-Chr10 39579524 39582912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02939 1 153 Antiporters AT3G01550 71.242 1.04e-64 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02939 K15283 - gmx:100819280 258.84