Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02919 ATGGAACTTCATGCAAAGTGGGGAAACAGGTGGTCCAAAATTGCAAAGCATCTACCAGGAAGAACTGACAATGAGATTAAGAACTTCTGGAGGACAAGGATACAAAAGCACATTAAGCAAGCTGAGAACTTCCAACAACAGAGTAATTTAGAGATAAATGATCATCAAACAAGCACTAGCTGCAGCCAAGTGTCCACCATGGCAGAGCCCATGGAGACCTACTCTCCATCCTCATATCAAGGAACTTTGGAGCCATTTACAACTCATCAGTTCCCCACAATCACTGATCATCAATCAAGTTGTTGTACCAATGACAACAACTATTGGAGCATGGAGGATATCTGGTCTATGCAATTACTCAATGGGGATTAA 372 0.4194 MELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQAENFQQQSNLEINDHQTSTSCSQVSTMAEPMETYSPSSYQGTLEPFTTHQFPTITDHQSSCCTNDNNYWSMEDIWSMQLLNGD. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02919 123 SUPERFAMILY Homeodomain-like 2 40 IPR009057 -
Seca10g02919 123 CDD SANT 2 32 IPR001005 -
Seca10g02919 123 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 38 IPR017930 -
Seca10g02919 123 Pfam Myb-like DNA-binding domain 2 32 IPR001005 -
Seca10g02919 123 Gene3D - 1 65 - -
Seca10g02919 123 FunFam Myb-related protein 305 1 62 - -
Seca10g02919 123 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 87 IPR044676 GO:0003700|GO:0006355|GO:0043565
Seca10g02919 123 SMART sant 2 36 IPR001005 -
Seca10g02919 123 ProSiteProfiles Myb-like domain profile. 1 34 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02919 Seca-Chr10 39090015 39093245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02919 1 123 MYB Transcription Factor Family AT3G27810 52.857 6.68e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca10g02919 Myb_DNA-binding 3.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02919 K09422 - gmx:778046 216.853