Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02911 ATGCCTGAAGGGAGCAAAAGGAGGATACATTTTAGCAAACTATATTCTTTTTCTTGTTTAAAATCTCCGTTTAGAGATGTCCATTCCCAAATTGGGCAGAAAGGGTACTCAAGGGTTGTCTACTGTAATGATCCTGATAACCCAGATGCAATTCAGTTGAATTATAGAGGCAACTATGTTTCAACGACCAAGTATACAGCTTTTAATTTTATCCCCAAGTCTTTGTTTGAGCAGTTCAGAAGGGTTGCAAATATCTACTTTCTTATTGTGGCTTGTGTTTCATTTAGTCCACTGGCACCTTTTACAGCTCTAAGTATTGTTGCACCTTTGCTGGTTGTGATTGGAGCTACTATGGTCAAGGAAGCCGTGGAAGATTGGAGAAGGAGAAAGCAGGATATAGAGGCAAACAACCGAAAGGTTCAGGTATATGGCAGAAACTATACATTTGTGGAGACTAGATGGAAGAAACTCCGTGTTGGTGATATCATTAAAGTAAATAAGGATGAATACTTTCCTGCTGATCTTCTTCTGCTTTCCTCAAGCTATGAGGATGGGGTTTGCTATGTTGAGACAATGAATCTTGATGGAGAAACCAATCTAAAGTTAAAGCATGCCTTGGAAGTGACAACTCATCTTCAAAATGAAAAATCTCTCCAAAAGTTTAGGGCTATGGTCAAATGTGAGGATCCTAATGAAAATCTATACTCATTCATTGGAACTTTACAGTACGAGGGTAAAGACTATCCTCTTTCCTTGCAGCAGATCCTTTTAAGAGATTCTAAGCTGAAAAACACTGAATATATCTATGGTGTTGTTATCTTTACTGGCCATGATACAAAAGTAATGCAGAATTCCACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAACTGGATAAGATAATCTACATCCTCTTCAGCACCTTGATTTTGGTATCCTTTATTGGTTCTGTCTTTTTTGGTGTTGAGACCAAAAGGGATATTAGTGCTGGCAATTACAGAAGATGGTATCTTCGTCCAGACAATACAACAGTGTTTTATGATTCTAGAAGGGCAACACTTGCTTCTATTCTTCATTTTTTGACTGCCCTTATGTTGTATGGATATCTAATTCCGATATCACTTTATGTTTCCATAGAGATTGTGAAAGTTCTGCAGAGTATTTTTATCAACCAAGATCAGGAAATGTACTATGAAGATACAGATAGGCCAGCTCATGCACGCACGTCTAATTTGAATGAGGAACTTGGTCAGGTTGATACAATACTGTCTGACAAAACCGGTACTTTGACATGTAACTCTATGGAGTTTGTCAAATGTTCCATAGGGGGAATTCCATATGGTCGTGGTATGACAGAAGTGGAGAAAGCACTTGCTAGGAGAGGGAAAAATGTGGAATCTGAGGTGGATGGTTTATCATCTGATTTCTTGGGCCAGAATAGTGATGCTGTGGACTCTAAAAGACCAATTAAGGGCTTTAACTTTAGAGATGAACGCATAATGAGTGGGCAATGGGTTAATGAACCACAACCAGACATCATACAGAAATTCTTTCGAGTTTTAGCTATTTGTCATACAGCTATTCCAGAAGAACATAAAGATTCAGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCATTTGTCATAGCTGCAAAGGAGCTTGGTTTTGAGTTTTTCGCAAGGACACAAACAAGCATATCATTGCATGAATTAAATTATGGAAGTGGAAAAAAGGTTGACAGAGTGTACCAGCTTTTGCATGTGTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATAGTGAGGAATGAGGAAAATCAAATATTGCTCCTATGCAAGGGTGCAGACAGTGTCATGTTTGAAAGGCTCTCGCAAAATGGAAGACAATTTGAGGCTGAAACCAAGGATCATATCAAGAGATATTCTGAGGCAGGTTTAAGAACTCTCGTAGTCACATACCGTGAACTTGGTGAAGAAGAATATAAACTGTGGGACAAGGAGTTTTCCAAGGCCAAAACTTCTGTAGCAGCAGAGAGAGATGCACTGGTGGATGCAGCTGCTGATAAGATGGAAAGAGATTTGATACTTCTTGGTGCTACAGCAGTTGAGGATAGACTGCAAAAAGGGGTTCCTGAATGTATTGAAAAGCTTGCCCAGGCAGGAATCAAGTTATGGGTATTGACTGGGGACAAGATGGAAACTGCAGTCAACATAGGGTATGCTTGTAGTTTACTTAGACAAGACATGAAAAAGATAGTGATCACTCTTGATTCACCAGATATCCTATCCTTGGAAAAACAAGGGGACAAGGAGGCTCTAGCCAAGAAGCAAATCAGCGAGGGAATCTCGCAAATCAAGTCTGCAAAAGAGAGTTCTAATACAGACAAAGGAAGTTCTTCTTCATTTGGCTTGATAATTGATGGGAAGTCCTTGGATTATTCTCTTAACAAGATTTTGGCAAACTCCTTCTTTGAGTTGGCAATTAATTGTGCTTCTGTCATATGTTGCCGATCTTCACCAAAACAGAAAGCTCGTGTTACTAAATTGGTGAAACTGGGAACAGGGAAGACAACATTATCTATTGGTGATGGCGCAAATGATGTTGGAATGCTTCAGGAGGCTGATATTGGAGTTGGAATTAGTGGTGCTGAAGGGATGCAGGTCAAAAGATACATTTATTTGTACCTATTTGCTGTAATGGCAAGTGATTTTGCAATTGCTCAATTCCGTTTTCTGGAGCGATTGTTGTTGGTACATGGCCACTGGTGTTATAGGCGAATATCAATGATGATATGCTATTTTTTCTATAAAAACATTGCATTTGGCTTTACCCTATTTTGGTTTGAGGCATATGCTTCTTTCTCTGGACAAGCTGCATACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCAGTAATCGCCCTAGGTGTTTTTGATCAGGATGTTTCTGCCAGACTTTGTCTAAAGTATCCCTTTCTATATCTAGAGGGAGTAGAGGGCACCCTCTTCAGCTGGCCCCGGATTCTTGGCTGGATGTTGAATGGAGTCCTCAGTTCTTTAGCCATCTTCTTCTTGACCACAAATTCTGTCTTAAGCCAGGCCTTCAGAAGAGATGGTCAGATGGTTGATTTTGAAATACTTGGGGTCACAATGTATACTTGTGTGGTGTGGACTGTGAATTGCCAAATGGCACTGTCCATTAACTACTTCACTTGGATCCAGCACTTTTTCATATGGGGCAGCATTGCCTTCTGGTATGTATTTGTGCTGATTTATGGTTATCTCTCTCCAGCCATATCCACAACAGCTTACATGGTTTTTGTTGAAGCATGTGCTCCCAGTGGTCTATATTGGCTAGTTACCCTTTTGGTTGTTGTATGTGTGCTTCTACCTTATTTCTGCTATAGATCTTTCCAGAGTCGGTTTCTACCAATGTACCATGATATTATACAGAGAAAACAAGTTGAAGGGTCTGAAATAGAGATATCTGATGAGTTACCTCAACAAGTCCAAGGCAAACTAATACATCTCAGAGAGAGATTGAAGCAACGGGAACCGTGA 3591 0.3991 MPEGSKRRIHFSKLYSFSCLKSPFRDVHSQIGQKGYSRVVYCNDPDNPDAIQLNYRGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACVSFSPLAPFTALSIVAPLLVVIGATMVKEAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDIIKVNKDEYFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKHALEVTTHLQNEKSLQKFRAMVKCEDPNENLYSFIGTLQYEGKDYPLSLQQILLRDSKLKNTEYIYGVVIFTGHDTKVMQNSTDPPSKRSKIERKLDKIIYILFSTLILVSFIGSVFFGVETKRDISAGNYRRWYLRPDNTTVFYDSRRATLASILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDQEMYYEDTDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKNVESEVDGLSSDFLGQNSDAVDSKRPIKGFNFRDERIMSGQWVNEPQPDIIQKFFRVLAICHTAIPEEHKDSGEISYEAESPDEAAFVIAAKELGFEFFARTQTSISLHELNYGSGKKVDRVYQLLHVLEFSSSRKRMSVIVRNEENQILLLCKGADSVMFERLSQNGRQFEAETKDHIKRYSEAGLRTLVVTYRELGEEEYKLWDKEFSKAKTSVAAERDALVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLAQAGIKLWVLTGDKMETAVNIGYACSLLRQDMKKIVITLDSPDILSLEKQGDKEALAKKQISEGISQIKSAKESSNTDKGSSSSFGLIIDGKSLDYSLNKILANSFFELAINCASVICCRSSPKQKARVTKLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQVKRYIYLYLFAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYNVFFTSLPVIALGVFDQDVSARLCLKYPFLYLEGVEGTLFSWPRILGWMLNGVLSSLAIFFLTTNSVLSQAFRRDGQMVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFVLIYGYLSPAISTTAYMVFVEACAPSGLYWLVTLLVVVCVLLPYFCYRSFQSRFLPMYHDIIQRKQVEGSEIEISDELPQQVQGKLIHLRERLKQREP. 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02911 1196 Gene3D - 111 287 - -
Seca10g02911 1196 SUPERFAMILY HAD-like 419 931 IPR036412 -
Seca10g02911 1196 Gene3D - 703 916 IPR023214 -
Seca10g02911 1196 Gene3D - 561 702 IPR023299 GO:0000166
Seca10g02911 1196 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Seca10g02911 1196 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Seca10g02911 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1165 - -
Seca10g02911 1196 SFLD C1.7: P-type atpase like 406 927 - -
Seca10g02911 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 904 1154 IPR032630 -
Seca10g02911 1196 CDD P-type_ATPase_APLT_Dnf-like 57 1036 - -
Seca10g02911 1196 Coils Coil 116 136 - -
Seca10g02911 1196 Pfam Phospholipid-translocating ATPase N-terminal 40 103 IPR032631 -
Seca10g02911 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 665 IPR023299 GO:0000166
Seca10g02911 1196 SFLD p-type atpase 406 927 IPR044492 -
Seca10g02911 1196 FunFam Phospholipid-transporting ATPase 544 702 - -
Seca10g02911 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1153 IPR023298 -
Seca10g02911 1196 FunFam Phospholipid-transporting ATPase 702 916 - -
Seca10g02911 1196 Pfam Cation transport ATPase (P-type) 526 629 - -
Seca10g02911 1196 NCBIfam HAD-IC family P-type ATPase 834 959 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca10g02911 1196 SUPERFAMILY Calcium ATPase, transduction domain A 143 284 IPR008250 -
Seca10g02911 1196 FunFam Phospholipid-transporting ATPase 116 286 - -
Seca10g02911 1196 Pfam E1-E2 ATPase 136 330 - -
Seca10g02911 1196 NCBIfam phospholipid-translocating P-type ATPase 55 1162 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Seca10g02911 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02911 Seca-Chr10 38747224 38756726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02911 9 1167 Primary Pumps ATPases AT1G68710 63.560 0.0 1589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02911 K01530 - gmx:100817020 2146.32