Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02895 ATGTTGGATTTGAGCACCGTTTGCTTTGATAGAATGTTAAAATATGATCTCCTCACAGGCGTAAGCTTTGTCTCTGGTGGTTCTGGATATGATCCTCTAACTTCTCAAACGCCAATTAGACTTGCACACTATGACATTCTGTCATACACAGACTTGATGGTTTCACAAGCCTCAAACTTCTGGCATGAACTTTATGGATTGGGAGCTAGAAGGATTGGAGTTATTGGTTTTCCACCAATAGGGTGCGTGCCCTCACAAAGAACAATTAGTGGAGGAATACAGAGAGCATGTTCTGATTCTGAAAAACAAGCAGCAATCCTCTTCAACACAAAGCTCTTATCTCAAATGGATGCCCTTAAAGAACCTAACTCGAAGGTTCAAAACAAGACTATGAAACGCTTGTGCAATAAGCAAGTGATTTTCACAGTTAATGGATGTTTCCCTGGACCAAGGATAAATGTCCGCGAAGGTGACACAGTGATTGTCATGTATTGA 495 0.4101 MLDLSTVCFDRMLKYDLLTGVSFVSGGSGYDPLTSQTPIRLAHYDILSYTDLMVSQASNFWHELYGLGARRIGVIGFPPIGCVPSQRTISGGIQRACSDSEKQAAILFNTKLLSQMDALKEPNSKVQNKTMKRLCNKQVIFTVNGCFPGPRINVREGDTVIVMY. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02895 164 Pfam GDSL-like Lipase/Acylhydrolase 51 122 IPR001087 GO:0016788
Seca10g02895 164 Pfam Multicopper oxidase 126 163 IPR011707 GO:0005507
Seca10g02895 164 SUPERFAMILY Cupredoxins 115 162 IPR008972 -
Seca10g02895 164 Gene3D SGNH hydrolase 40 149 IPR036514 -
Seca10g02895 164 PANTHER GDSL ESTERASE/LIPASE EXL3 39 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02895 Seca-Chr10 38309900 38311156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02895 11 112 Pollen Coat Proteome AT1G75930 28.387 2.11e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02895 - - gmx:100809562 129.413