Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02882 ATGAGGAAGAGTGAGAGTGGGGGTGGTGGTGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGACATCTGAGCAGAGCATGGACCATGGAGAAGAACAAGGAGAAGGAAGAAGATGAGCATGAAGGAAGGTCTACACGAAGTAGGCAAGAATGGGAGATTGACCCCTCCAAGCTCATCATCAAGACCGTCATTGCTCGTGGCACTTTTGGCACTGTTCACCGTGGGATTTATGATGGCCAAGATGTTGCAGTTAAGCTCCTTGATTGGGGGGAAGAGGGCCATCGGTCAGATGCTGAAATAGCTTCATTGAGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGTTTATTGGGGCGACAATGGGAACATCAGACCTACAGATACAAACGGAAAGTGGCCATATAGGCATGCCCAGTAATGTTTGTTGTGTTGTTGTTGAATATTGTCCTGGGGGTGCACTGAAGTCTTATCTCATAAAAAACCGGAGAAGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCAAGAGGGTTGAGCTATCTACACACAAAGAAGATTGTCCACAGAGATGTTAAAACAGAAAACATGCTTCTGGACAAGACACGGACCTTGAAAATAGCTGATTTTGGAGTAGCTCGTATTGAGGCTTCCAATCCTCATGACATGACTGGTGAAACTGGAACCCTTGGTTATATGGCTCCTGAGGTTCTAAATGGTAATCCATACAATAGAAAATGTGATGTGTACAGTTTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGCTTCTCAGAAGTGACATCAGCTGTCGTACGACAGATTCTTTATGGAACTGCAGAATCTTAG 930 0.4505 MRKSESGGGGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKEEDEHEGRSTRSRQEWEIDPSKLIIKTVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSDLQIQTESGHIGMPSNVCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHTKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQILYGTAES. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02882 309 PIRSF ILK 16 302 - -
Seca10g02882 309 Gene3D Phosphorylase Kinase; domain 1 54 150 - -
Seca10g02882 309 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 57 300 - -
Seca10g02882 309 SUPERFAMILY Protein kinase-like (PK-like) 52 302 IPR011009 -
Seca10g02882 309 CDD STKc_MAP3K-like 72 301 - -
Seca10g02882 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Seca10g02882 309 MobiDBLite consensus disorder prediction 34 58 - -
Seca10g02882 309 FunFam Kinase suppressor of Ras 1 55 150 - -
Seca10g02882 309 SMART serkin_6 66 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02882 309 Pfam Protein tyrosine and serine/threonine kinase 68 298 IPR001245 GO:0004672|GO:0006468
Seca10g02882 309 ProSiteProfiles Protein kinase domain profile. 66 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02882 309 Gene3D Transferase(Phosphotransferase) domain 1 151 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02882 Seca-Chr10 38111606 38116927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02882 3 303 MAP Kinase Kinase Kinase AT3G01490 77.778 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Seca10g02882 PK_Tyr_Ser-Thr 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02882 - - aprc:113866520 600.127