Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02865 ATGGATCTTGAGTCTGTGATCTACAAGAACCCAATTAAGGAAGAATCATGGAAGACAGTGTTGATTCTGGCTTATCAGAGCTTGGGAGTTGTCTATGGAGACTTGAGCACTTCTCCACTTTACGTTTACAAAAGCACTTTTGCTGAGGATATTCAGCATTCAGAGACTAATGAAGAAATCTATGGGGTCTTGTCTTTTGTGTTCTGGACACTTACACTGATTCCACTCTTCAAGTATGTGTTCATTGTGCTGCTAGCTGATGACAATGGTGAAGGAGGGACTTTTGCTCTCTATTCCTTGCTATGCAGGCATGCCCGTGTTAGCTTGTTGCCTAACACTCAGCTTGCAGATGAGGACTTAACACAGTACACTATAGATGGAACTGTGCCAATCAATAAGAAAAATGTTGGGTCAGGCTTGAAATCCTTGTTGGAGAAACACAGGGTGCTGCAGAGGGTATTGCTTATTCTGGCTTTGATAGGGACTTGCATGGTTATTGGGGATGGTGTGCTCACACCAGCAATATCTGTTTTTTCTGCTGTGTCAGGTTTGGAGCTTTCCATGTCTAAAGAGCAGCACCGATATGTGGAGGTTCCAGTTGCTTGTATAATACTGATATTTTTGTTTGCCCTTCAACACTATGGCACTCACCGTGTGGGATGTCTTTTTGCACCTGTTGTGATGACCTGGCTGCTATGCATCAGTGCTATTGGTGTTTATAATATCTTCCATTGGAATCCACATGTTTATGAAGCTCTCTCCCCATACTACATGTTCAAATTTCTGAAAAAGACTCAAAAGGGAGGATGGATGTCCTTAGGCGGGATTCTATTGTGCATAACAGGTTCAGAAGCTATGTATGCTGATTTAGGACACTTTTCACAATTGTCAATTAAGATTGCTTTCACCTTTTTGGTATACCCTTCTTTGATCCTGGCATACATGGGACAAGCTGCATATCTTTCCAGGCATCATGCCCTTGAAAGTGACTATCGAATCGGGTTTTACGTATCTGTCCCAGTAAAACTTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCAGTGGTGGGAAGTCAAGCTGTCATCACAGGGACTTTCTCAATAATCAAACAATGTTCTGCTTTGGGATGCTTCCCCAAAGTCAAAATCATTCATACATCATCCAAGATACATGGCCAGATTTACATTCCTGAGATAAACTGGAGTTTGATGCTACTTTGCCTTGCCATTACAGTTGGATTTCGAGATACTAAACGCATGGGAAATGCTGCAGGCTTGGCTGTCATAACTGTCATGCTGGTGACCACTTGCCTAATGTCTCTAGTTATAATCTTATGCTGGCACAAAAGTCCCATGCTAGCTATTTGCTTTATAGTGTTCTTTGGCTCCATTGAAGCACTCTATTTCTCTGCATCCCTCATCAAGTTCCTTGAGGGTGCTTGGGTCCCCATTGCCCTCTCCCTCATCTTTTTGATTGTCATGTATGTGTGGCACTATGGCACAATTAAGAAGTATGAGTTTGATGTTCAAAATAAGGTCCCCATCAACTGGCTCCTCAGTTTGGGCCCAACTCTAGGAATTGTCAGGGTTAAGGGAATTGGCCTCATACATACTGAGCTTGTATCTGGGATTCCAGCTATTTTCTCTCACTTTGTTACCAATCTACCAGCTTTCCATCAAGTTGTAATCTTCCTCTGCATCAAATCTGTCCCAGTACCACATGTCAGACCTCAAGAAAGGTTCTTAGTTGGGAGAGTTGGCCCAAAAGAATATAGACTATATAGGTGCATAGCACGGTATGGCTACCGTGATGTCCACAAGGATGACATGGAGTTTGAGAAGGATCTTGTTTGCAGTATAGCAGAATTTATCAGATCAGATACTTCTGAATATGGCTTAGGATTTGGGAATTTTGAAGATGACACAAAGATGACAGTTGTTGGGACTTCTTCATCAAACTTAGAGGGTGTAAGGATGTCTGAAGATGATCAAGACAATAATTCTCAAATGGAAGGAACTTCCACAGAGTTGATGGAGGTTAAGTCCCCTGAGAAAGTGAAGAAGAGAGTGAGGTTTGTTGTGCCAGACAGTCCAAGGATTGATTTGGAAGCAAGGGAGGAGTTGCTTGAGCTAATGGAAGCAAAGGAAGCAGGAATGGCATTTATAATGAGTCACTCATATGTGAGAGCAAAAAGAGGATCAAGTTGGATAAAGAAAGTTGTTATCAATTATGGATATGATTTCTTAAGGAGAAACTCTAGAGGACCAACTTATGCTTTAAGTTTACCTCATGCATCTACCTTAGAGGTGGGCATGATCTATCATGTCTAA 2334 0.4195 MDLESVIYKNPIKEESWKTVLILAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLFKYVFIVLLADDNGEGGTFALYSLLCRHARVSLLPNTQLADEDLTQYTIDGTVPINKKNVGSGLKSLLEKHRVLQRVLLILALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPVACIILIFLFALQHYGTHRVGCLFAPVVMTWLLCISAIGVYNIFHWNPHVYEALSPYYMFKFLKKTQKGGWMSLGGILLCITGSEAMYADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSRHHALESDYRIGFYVSVPVKLRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKIHGQIYIPEINWSLMLLCLAITVGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIILCWHKSPMLAICFIVFFGSIEALYFSASLIKFLEGAWVPIALSLIFLIVMYVWHYGTIKKYEFDVQNKVPINWLLSLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCIKSVPVPHVRPQERFLVGRVGPKEYRLYRCIARYGYRDVHKDDMEFEKDLVCSIAEFIRSDTSEYGLGFGNFEDDTKMTVVGTSSSNLEGVRMSEDDQDNNSQMEGTSTELMEVKSPEKVKKRVRFVVPDSPRIDLEAREELLELMEAKEAGMAFIMSHSYVRAKRGSSWIKKVVINYGYDFLRRNSRGPTYALSLPHASTLEVGMIYHV. 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02865 777 NCBIfam potassium uptake protein 23 777 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca10g02865 777 MobiDBLite consensus disorder prediction 657 680 - -
Seca10g02865 777 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca10g02865 777 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 776 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02865 Seca-Chr10 37721017 37727640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02865 1 775 Inorganic Solute Cotransporters AT5G14880 77.308 0.0 1232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02865 K03549 - gmx:100793387 1433.7