Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02855 ATGGCAAGAAGATGGTCCTTTTACAGGGATTTGCTACCAATTTTGGTGATTATAGGCAATGAATGCAATGACATGGGCACTTTAACTCTGTTCAAAGCAGCCACCCTCCAAGGAATGAACAATCATGTCTTTGTTGCCTATGCTTATGCTGTTTCCACTACTGTGCTCTTTCCTCTCTATTTTTTCACCAAAAGATCAAGAATGGTTCCTCCACTCAGTTTCCCAATCCTATCCAAAATGGTTCTTCTTGGGGTCATAGGGAGTTCATCCCAAATCCTTGGATATGCTGGCATTAATTACAGTTCACCAACACTTGCTTCATCAATCGGCAATCTTGTACCTGCTTTCACCTTCATGCTTGCCGTCACTTTCAGATTAATGCCATACGCCAAGAATGAAGGTTTCAATTTCCTTGGTACTTGGATGGAAAAGTTAGCTGCAAAGAGTAGAAGTAGTCAAGCTAAGGTAGTGGGAAGCATAATATCAATAGCAGGTGCATTTGTGTTGTCTTTCTACAAAGGCCCAGCAATCATCAATGCTCATACCCATCTCACCTCAGCACTTCATCAATCAATTCGCTTTCTTAGTTCAGAGGATGCAAGTTGGGCCATTGCTGGCATTCTGCTGACAGCTGACTATTTTCTAGTTTCACTATGGTACATTTTACAGGTGAATATCTTGAAAGAGTTCCCGGATGAACTAACTTTAGTCTTCATTTACAACGTGACTGCCACCATCCTATCTACAATTGTAGGTTTATTGACAGTGTCAGATGCAAGTGCTTGGAAAATAGGACTAGATATTTCACTGGTCTCCATTCTTTGCTCTGGAATATTTGGAAAGTTAATAAGCAATGTAGTTTTTGCCTGGGCACTGCGCTTAAAAGGTGCTGTCTTTGTAACATCCTTCAAGCCAGTCCAAATTGTGATTGCTGTTGTCATGGGAGTTATTTTCCTTGGTGATACTCTTCATGTAGGAAGTATAATTGGAGCCACAATAATATCAATTGGCCTTTATGCTGTATTGTGGGGCAAAGTAACAGAAGAGGTAGAGGAAGATGTTGGTAGCCTGGAATCACCAACTACAGAGAATGTTCCTCTCTTGCAAAGCTACAGTGCTGAAACTTTTGAAAAGAAAATAAATGGAAATGTTTAA 1155 0.4043 MARRWSFYRDLLPILVIIGNECNDMGTLTLFKAATLQGMNNHVFVAYAYAVSTTVLFPLYFFTKRSRMVPPLSFPILSKMVLLGVIGSSSQILGYAGINYSSPTLASSIGNLVPAFTFMLAVTFRLMPYAKNEGFNFLGTWMEKLAAKSRSSQAKVVGSIISIAGAFVLSFYKGPAIINAHTHLTSALHQSIRFLSSEDASWAIAGILLTADYFLVSLWYILQVNILKEFPDELTLVFIYNVTATILSTIVGLLTVSDASAWKIGLDISLVSILCSGIFGKLISNVVFAWALRLKGAVFVTSFKPVQIVIAVVMGVIFLGDTLHVGSIIGATIISIGLYAVLWGKVTEEVEEDVGSLESPTTENVPLLQSYSAETFEKKINGNV. 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02855 384 Pfam EamA-like transporter family 211 342 IPR000620 GO:0016020
Seca10g02855 384 Pfam EamA-like transporter family 26 124 IPR000620 GO:0016020
Seca10g02855 384 PANTHER WAT1-RELATED PROTEIN 12 356 IPR030184 GO:0016020|GO:0022857
Seca10g02855 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 262 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02855 Seca-Chr10 37570648 37574823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02855 1 374 Nodulin-like Gene Family AT3G28050 45.736 3.59e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02855 - - gmx:100790743 541.191