Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02848 ATGGCGCAAGGGTTCGCGATCGAGCTCTACATGGACCCTGCGCTGGAAAACCAGGTTCTGAAAGCGTGGAATGTTCTTGCCAGAAGACAAATCAGCACTCAGCTCATCGAAATGGAATCACGCCCTCACATCACTCTCTTCTCCACCCAATTTCTAGAACCTTCCAAGCTCGAGTCACTTCTTAAAACCCTCGCCTCAAAACACGACCCTTTCCCTCTCTCATTCTCTTCCATCGGTGCATTCCCCAACGACAACAACGTTCTCTTCCTCTCTCCTACACCTTCCCTCTCACTGCTTCAGTTTCAGTCACAGCTATGTGATGCTATCAGAAAAGAAGGCATTGACGTTGGCGACGACTACACCCTCGGTTCTTGGATACCTCATTGTTCCGTTGCACACCAAGTCCCTAAAGCTAGGATGGCTGAGGCTTTCTCTCTCTTGAGGGACTTGAAATTGCCGGTTACCGGTTACGCCGTCGACGTTGCCCTCGTTCAGTTCTCCCCGGTTCGCGAGCTCTTCTCCTTTGTACTTGGCAATGGCAACACTCTAGATCCCTAA 558 0.5072 MAQGFAIELYMDPALENQVLKAWNVLARRQISTQLIEMESRPHITLFSTQFLEPSKLESLLKTLASKHDPFPLSFSSIGAFPNDNNVLFLSPTPSLSLLQFQSQLCDAIRKEGIDVGDDYTLGSWIPHCSVAHQVPKARMAEAFSLLRDLKLPVTGYAVDVALVQFSPVRELFSFVLGNGNTLDP. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02848 185 PANTHER - 1 180 - -
Seca10g02848 185 Gene3D Cyclic phosphodiesterase 5 179 - -
Seca10g02848 185 Pfam 2'-5' RNA ligase superfamily 41 165 - -
Seca10g02848 185 SUPERFAMILY LigT-like 5 154 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02848 Seca-Chr10 37475985 37476542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02848 1 179 Calmodulin-binding Proteins AT5G40190 68.156 1.38e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02848 - - csv:101208638 283.878