Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02832 ATGGCAACATCATCCAACACCCTCACTCTCTTCCTCTTTCTCACCACATTGTCATTGTCGTTGTTCATTAACATCACTCCCTCACACGCCAGACTCACCTTGGACTACTACCACCAAACCTGCCCACAGTTCAACCAGATCATCCAAGACACCGTCACCAACAAACAGATCAACAGCCCCACCACCGGCCCCGCCACTCTCCGCCTCTTCCTCCACGACTGCCTCCTCCCCAACGGCTGCGACGCCTCCATCCTCCTCTCTTCTACCTCTTTCAACAAAGCCGAACGCGACGCCGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACCTCGTCGTACGCGCCAAAACCGCCCTCGAACTCGCCTGTCCCAACACCGTCTCTTGCGCCGACATCCTCGCCGCCGCCACCCGCGACCTCCTCATCATGCTCGGCGGCCCCCATTACCCTGTCTTCCTCGGCCGCCGCGACGGCCGATTTTCACGCGCCTCCGATGTTGAGGGCCACCTCCCTAGACCCTCCATGCCCATGTCCCAAATTGTTGAAATCTTCACCAAACGAGGCTTCACCGTGGAGGAAATGGTTGCTCTCAGTGGCGCTCACACTGTTGGGTTCTCCCATTGTTCTGAATTCACCTCCGATATTTACAACAACAGTGCGGGTTCTCAGTATAACCCTCGTTTTGCTCAGGGGTTGGAGAGTGCTTGTGCTGATTACAAAAAGAATCCAACTTTGTCTGTTTTCAATGATATCATGACCCCTAACAAGTTCGACAATGTTTACTTCCAGAACCTTCCGAAGGGATTAGGGTTGTTGAAATCTGATCATGGGTTGTACAGTGACCCTGCAACAAAACCCTTTGTGGAGAAATTTGCAGCGGATCAGGGCAGGTTCTTTCAGGTGTTTGCTCGGGCAATGCAGAAGCTTAGTCTTTTGAATGTGCAGACTGGGAGGAAAGGAGAGATCAGACGCAGGTGTGATCAGATTAATTGA 993 0.5337 MATSSNTLTLFLFLTTLSLSLFINITPSHARLTLDYYHQTCPQFNQIIQDTVTNKQINSPTTGPATLRLFLHDCLLPNGCDASILLSSTSFNKAERDADINLSLPGDAFDLVVRAKTALELACPNTVSCADILAAATRDLLIMLGGPHYPVFLGRRDGRFSRASDVEGHLPRPSMPMSQIVEIFTKRGFTVEEMVALSGAHTVGFSHCSEFTSDIYNNSAGSQYNPRFAQGLESACADYKKNPTLSVFNDIMTPNKFDNVYFQNLPKGLGLLKSDHGLYSDPATKPFVEKFAADQGRFFQVFARAMQKLSLLNVQTGRKGEIRRRCDQIN. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02832 330 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 SUPERFAMILY Heme-dependent peroxidases 32 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 CDD secretory_peroxidase 32 329 IPR033905 GO:0004601|GO:0042744
Seca10g02832 330 Gene3D - 35 330 - -
Seca10g02832 330 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 FunFam Peroxidase 35 185 - -
Seca10g02832 330 ProSiteProfiles Plant heme peroxidase family profile. 31 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 FunFam Peroxidase 171 309 - -
Seca10g02832 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Seca10g02832 330 Gene3D Peroxidase, domain 2 171 309 - -
Seca10g02832 330 PANTHER - 16 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02832 330 Pfam Peroxidase 52 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02832 Seca-Chr10 37037392 37038384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02832 28 330 Peroxidase AT3G28200 66.337 1.48e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02832 K00430 - gmx:100798144 516.924