Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02815 ATGGATTTAGTTCTAAATTTTCAAAACGCCACTGGAATTGCACTCCTTTCTCTAACATTCTTTTTCTGTTTATTTCTATTTCGTCCTTCCAATTCCAAAGTTGTTAAAGCTAGAGAACCTCCTATGGCCTCAGGTGCATGGCCTATACTTGGTCACCTCTTGATATTGGGTGGTTCCCCAACACCCCATAAAACTTTGGGTGCCATGGCTGACAAATATGGACCCCTTTTCACCATCAAGCTTGGTACCAAACATGCTTTGGTACTAAGCAATTGGGAAATGGCCAAAGAATGTTACACCACAAACGACCTAATTGTTTCCTCTCGCTCTAAGCTTGTTGCAATTGAACACATAGCATACAACCAAGCAAGTTTTGGTTTTGCACCCTATGGTCCATATTGGCGTGAAATGCGTAAGATTGTTACCATGTTCCTCTCCAATCGCCGATTGGAGCTACTAAGCCACGTTCGAGCCACCGAAGTTGAAGCCTCGATTAAAGAGCTCTTCCATGTTTGGTCTAAGAATAATGAGTCTGGTGGCTATGTGTTGGTGGAGATGAAGCACTGGTTCACTAAGTTGGTGTTCAATATAGTTTTCCAAACAATGGCTGGGAAGCGATATTTTGGTAGCACGGCGGTTGTTAAAGAGAAAGAAGCGGACAAGTTTGTGAAGGCTTTAAGGGATTTCATGCATATGTTGGGAGTTTGCACTGTGGCTGATGCTGTTCCTGTTCTGAAATGGATGAATTTGGGTGTGAAAGCGATGAAAGAAACTGCCAAAGAATTGGATATTGTTATAGATGAGTGGTTGGTGGAACACAAAAAGAAGAGGGCTTTGGGTGAAAAGAGTGAAAGGGATCAAGATTTCATGGACATGATGCTTTCGGTGCTTGATGGAGCCAAGACTGATGGGCTCGATGCTGCTACTATAAACAAAGCTACAACATTGGCATTAATATTGGGAGCAACTGATACAAGCACTGTTACCCTAACGTGGGTGATATGTTTGTTGTTGAGAAATCCTCTCATATTAGAAAAAGCAAAAGAAGAACTAAATACCCAAGTTGCAGAAGAGAGATTCATCACTGAGTCAGATATAAATAAGTTGGTTTACCTTCAAGCAATAGTTAAAGAGACACTTAGGTTGTATCCTCCGGGTCCTCTTTCAGCACCTCGTGAATTCACAGAAGATTGTGTTTTAGGTGGCTATCATATCAAAAAGGGAACTCGACTAATTACAAACTTGTGGAAGATCCACACGGATCCTAGTATTTGGCCAGATCCATTGGAATTCAAGCCAGAAAGGTTCCTTACCACTCACAAAGAGGTTGATGTTAGAGGTCATCATTTTGAGTTGTTACCATTTGGAAGTGGTAGAAGGATATGTCCAGGAATATCATTTGGCCTTCACATGATTTATTTAACTCTGGCTAATTTTTTGCACTCCTTTGAAATATTAAGTAAATCTAGTGAACCTATTGATATGACTGAAACCCTTGGAATGACCAATGAAAAAGCTACTCCACTTGAGATTCTAGTTAAACCACGATTGTCTCATAAGTATTATGAAACCATGTGA 1578 0.4062 MDLVLNFQNATGIALLSLTFFFCLFLFRPSNSKVVKAREPPMASGAWPILGHLLILGGSPTPHKTLGAMADKYGPLFTIKLGTKHALVLSNWEMAKECYTTNDLIVSSRSKLVAIEHIAYNQASFGFAPYGPYWREMRKIVTMFLSNRRLELLSHVRATEVEASIKELFHVWSKNNESGGYVLVEMKHWFTKLVFNIVFQTMAGKRYFGSTAVVKEKEADKFVKALRDFMHMLGVCTVADAVPVLKWMNLGVKAMKETAKELDIVIDEWLVEHKKKRALGEKSERDQDFMDMMLSVLDGAKTDGLDAATINKATTLALILGATDTSTVTLTWVICLLLRNPLILEKAKEELNTQVAEERFITESDINKLVYLQAIVKETLRLYPPGPLSAPREFTEDCVLGGYHIKKGTRLITNLWKIHTDPSIWPDPLEFKPERFLTTHKEVDVRGHHFELLPFGSGRRICPGISFGLHMIYLTLANFLHSFEILSKSSEPIDMTETLGMTNEKATPLEILVKPRLSHKYYETM. 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02815 525 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 FunFam Cytochrome P450 82C4 30 514 - -
Seca10g02815 525 SUPERFAMILY Cytochrome P450 46 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 Pfam Cytochrome P450 42 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 Gene3D Cytochrome P450 28 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 CDD CYP82 74 516 - -
Seca10g02815 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Seca10g02815 525 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02815 525 PANTHER CYTOCHROME P450 82C3-RELATED 18 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02815 Seca-Chr10 36827340 36829822 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02815 41 522 Cytochrome P450 AT4G31940 48.381 2.15e-171 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02815 - - gmx:100793075 690.263