Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02808 ATGGATTTAGTCCTAAGTTCCTTGAACAGTTACACCACTATGATTGCAATCCTTTCTCTAGTATTCTTTGTCTATTTATTTCTGTTCCGTCCCTCCAAAGCTGGTCATGGTAGAGAAGCTCCTTTAGTCGCAGGTGCATGGCCAATAATCGGTCATCTCCCACTACTGAGGGGATCTCAAACACCCCATAGAACATTGGGTGCCATTGCTGACAAGTACGGACCCATATTCACAATCAAGCTTGGTGCCACACCAGCGTTGGTGCTCAGCAGCTGGGAAATGGCGAAGGAATGCTTCACCACAAACGACCTGGTCGTTTCCTCTCGCCCCAAGCTTGTTGCAGTTGAACACATGGCCTACAACCAAGCCATGTTGGGCTTCGCACCCTATGGTCCCTATTGGCGCGAACTACGTAAGATTGTGATCTTAGAATTCCTCTCCAATCGCCGAATCGAGTTGCTAGGTCACGTTCGTGTCTCTGAACTTCAAACTTCGATCAAAGAACTGTTCAGTGTTTGGTCGAACAAAAAGAACGAGTCTGGGTACGTGTTGGTGGAGCTGAAGCAGTGGTTTGCACAATTGACATTCAACATGATACTTAGGATGATTGCTGGGAAGAGATATTTTGGTAGTATGGATGTGGATGAAGAGAAGGAAGCAGAGAGGTGTTTGAAAGCTTTGAACAAATTCATGCGTTTGATGGGTGTGTTCACTGTAGGAGATGCTATTCCTTGTTTAAGATGGTTAGATGTGGGTGGCCATGAGAAAGCCATGAAAAAAACTGGAAAGGAATTGGATAAGATTTTGAGTGAATGGTTAGAAGAGCACCGCCAAAAGAGAACTTCAAGTGAAATGATTGCGAGTGACGACCAAGACTTCATTGACGTCATGCTATCGGTGCTTGATACCGCAATGATTGACGGGTTTGACGCTGATACCATACACAAATCCACAACATTGGCATTAATTGTGGCAGGAACTGACACAACCACTGTTACACTTATATGGGCAATGTGTTTACTATTAAGAAATCCTCTCGCATTAGAGAAAGTAAAAGAAGAACTTAATAGTCAAGTTGGGGATGAAAGACGTGTAAGTGATTCAGATATAAACAAACTTGAGTACCTTCAAGCTATAGTTAAAGAAACGTTAAGATTGTATCCACCAGTCCCTCTCTCATTACCTCGTGAGTTCACAGATAATTGCACTTTAGGTGGCTACCATGTCAGAAAAGGAACTCGACTTATTACAAATCTGTGGAAGATCCAAACAGATCCTAGTGTTTGGCCAGATCCATTGGAATTCAAACCAGAAAGGTTCTTGACCACACATAAAAATGTTGATGTTAGGGGTCAACATTTTGAGTTGTTACCATTTGGAAGCGGTAGAAGAATGTGTCCAGGAATATCCTTTTCCCTTCATATAGTTCATTTAACTCTGGCTAGCTTTTTACACTCCTTTAAAATCTTAAATCCGTCTCCTGAATCTGTTGATATGACTGAAACCTTTAAAGTGAGCACCACCAAAGCAACTCCATTTGAGATTCTTATCAAGCCACGTTTGTCTCCCAAATGTTATGAAATCATCTGA 1590 0.4226 MDLVLSSLNSYTTMIAILSLVFFVYLFLFRPSKAGHGREAPLVAGAWPIIGHLPLLRGSQTPHRTLGAIADKYGPIFTIKLGATPALVLSSWEMAKECFTTNDLVVSSRPKLVAVEHMAYNQAMLGFAPYGPYWRELRKIVILEFLSNRRIELLGHVRVSELQTSIKELFSVWSNKKNESGYVLVELKQWFAQLTFNMILRMIAGKRYFGSMDVDEEKEAERCLKALNKFMRLMGVFTVGDAIPCLRWLDVGGHEKAMKKTGKELDKILSEWLEEHRQKRTSSEMIASDDQDFIDVMLSVLDTAMIDGFDADTIHKSTTLALIVAGTDTTTVTLIWAMCLLLRNPLALEKVKEELNSQVGDERRVSDSDINKLEYLQAIVKETLRLYPPVPLSLPREFTDNCTLGGYHVRKGTRLITNLWKIQTDPSVWPDPLEFKPERFLTTHKNVDVRGQHFELLPFGSGRRMCPGISFSLHIVHLTLASFLHSFKILNPSPESVDMTETFKVSTTKATPFEILIKPRLSPKCYEII. 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02808 529 CDD CYP82 74 520 - -
Seca10g02808 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 Pfam Cytochrome P450 45 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 FunFam Cytochrome P450 82C4 30 518 - -
Seca10g02808 529 PANTHER CYTOCHROME P450 82C3-RELATED 17 526 - -
Seca10g02808 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Seca10g02808 529 Gene3D Cytochrome P450 36 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02808 529 SUPERFAMILY Cytochrome P450 46 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02808 Seca-Chr10 36696663 36700263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02808 20 526 Cytochrome P450 AT4G31940 51.556 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02808 - - gmx:100803451 738.799