Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g02778 | ATGGATCGCAGGAACAGGTCATCGCTCCTCCTCCTCCTCTTGGGTTTGTGGGTTTTGTTGGCTTACTCGCAGGTTGAAGAAGACGATGTGAGATGTCTGAGGGGCATCAAGGACGCCCTGAAGGACCCTGAGGGTCGTCTTGCCACGTGGCGGTTCGAGAACAAAACCGTGGGTTTCATCTGCGACTTCGTCGGCGTGTCTTGCTGGAACCAAAGAGAGAACCGGGTCCTGGGTCTGGAGCTACAAGATATGAAGCTATCGGGTCGGGTCCCAGAGTCCTTGAAGTACTGTGGTAAGAGCTTGCAAAGGTTGAATCTTGGGTCAAACTCACTCACTTCTGAGATCCCACCTGAGATCTGTAGTTGGATGCCTTTTTTGGTGTTGATGGATTTGTCTGGTAATGATCTTTCCGGGCCTATACCCTCTACCCTTGTGAATTGTTCTTATTTGAATGAGTTGGTGCTGTCAGATAATCACCTTACTGGTTCCATTCCTTATGAGTTTGGGAGTTTGAGTAGGCTTAAGAGGTTTTCTGTGGCTAACAATCAACTTAGTGGGACTATTCCTGATTTTTTCAGTGGGTTTGATAGGGATAACTTTGCTGGGAATAGTGGGTTATGTGGGGGTCCTCTTGGTAAGTGTGGTGGGATGAGTAAGAAGAATCTTGCAATTATTATTGCTGCTGGGGTGTTTGGTGCTGCTGCTTCTTTGTTGTTGGCTTTTGGGTTGTGGTGGTGGTATCATTTGAGGTTGAGTGGGAGGAGGAAGAAAGGAGGGTATATGGTTGGGGGTGTTGATAATTGGGCTGTGAGGTTGAGGGGTCATAAGCTTGCTCAGGTAACTCTTTTTCAGAAACCAATTGTGAAGGTTAAGCTAGGGGATTTGATGGCTGCAACTAATAATTTTAGTGCTGAGAATGTTCTTATTTCTACAAGGACAGGAACTACTTATAGGGCTGATCTACCTGATGGCTCCACCCTCGCGGTGAAGCGGTTGAACACCTGTAAGATTGGGGAGAAGCAATTTCGGATGGAGATGAATCGGCTAGGCCAAGTTAGGCACCCAAATTTGGCACCTCTGTTGGGTTTCTGTGTTGTGGAAGAGGAGAAGCTGCTAGTTTATAAGCATATGTCGAATGGGACTCTGTATAACTTGTTGCATAAGTATAACAATGCATTGGATTGGATGATGAGGTTCAGGATAGGCTTGGGCGCAGCTAGGGGTCTTGCCTGGCTGCACCATGGGTGCCATCCTCCAATTATACAGCAAAACATTTGTTCCAATGTGATTCTTGTCGATGAAGAATTTGATGCTCGGTTGATGGACTTTGGACTTGCAAGGCTTATGACATCTGACTCTAATGGTAGTTTTGTGAATGGGGATTTGGGGGAACTTGGATATATAGCTCCGGAATATCCTAGTACCCTGGTTGCTTCATTGAAAGGGGATGTGTATGGATTTGGGGTTTTGCTTTTGGAGTTGGTCACCGGGCGCAAACCTCTTGAGGTGAGCAATGGTGATGAAGAATTTAAGGGTAACTTAGTGGATTGGGTGAATATGCATTCAAGTTCAGGTAGAATCAAGGATTGCATTGATAAAACCATATGTGGGAAGGGACATGATGAGGAGATTCTGCAGTTTCTGAAAATTGCATCTAGTTGTGTGGTTTCTCGCCCCAAGGATAGGTGGTCTATGTACCAGGTTTATCATTCATTAAAGAGTATATCCAAAGACCACAGTTTCTCTGAACATGATGATGAATTTCCCTTGATCTTTGGTAAGCCTGAAAACGAACCGGCGTAA | 1803 | 0.4559 | MDRRNRSSLLLLLLGLWVLLAYSQVEEDDVRCLRGIKDALKDPEGRLATWRFENKTVGFICDFVGVSCWNQRENRVLGLELQDMKLSGRVPESLKYCGKSLQRLNLGSNSLTSEIPPEICSWMPFLVLMDLSGNDLSGPIPSTLVNCSYLNELVLSDNHLTGSIPYEFGSLSRLKRFSVANNQLSGTIPDFFSGFDRDNFAGNSGLCGGPLGKCGGMSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLSGRRKKGGYMVGGVDNWAVRLRGHKLAQVTLFQKPIVKVKLGDLMAATNNFSAENVLISTRTGTTYRADLPDGSTLAVKRLNTCKIGEKQFRMEMNRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMSNGTLYNLLHKYNNALDWMMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARLMDFGLARLMTSDSNGSFVNGDLGELGYIAPEYPSTLVASLKGDVYGFGVLLLELVTGRKPLEVSNGDEEFKGNLVDWVNMHSSSGRIKDCIDKTICGKGHDEEILQFLKIASSCVVSRPKDRWSMYQVYHSLKSISKDHSFSEHDDEFPLIFGKPENEPA. | 601 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g02778 | 600 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 67 | 192 | - | - | |
Seca10g02778 | 600 | SUPERFAMILY | Protein kinase-like (PK-like) | 281 | 572 | IPR011009 | - | |
Seca10g02778 | 600 | FunFam | Inactive LRR receptor-like serine/threonine-protein kinase BIR2 | 264 | 376 | - | - | |
Seca10g02778 | 600 | Pfam | Leucine rich repeat N-terminal domain | 27 | 69 | IPR013210 | - | |
Seca10g02778 | 600 | Gene3D | Phosphorylase Kinase; domain 1 | 264 | 376 | - | - | |
Seca10g02778 | 600 | ProSiteProfiles | Protein kinase domain profile. | 302 | 582 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g02778 | 600 | SUPERFAMILY | L domain-like | 27 | 197 | - | - | |
Seca10g02778 | 600 | FunFam | Inactive LRR receptor-like serine/threonine-protein kinase BIR2 | 26 | 215 | - | - | |
Seca10g02778 | 600 | FunFam | Inactive LRR receptor-like serine/threonine-protein kinase BIR2 | 377 | 594 | - | - | |
Seca10g02778 | 600 | Gene3D | Transferase(Phosphotransferase) domain 1 | 377 | 595 | - | - | |
Seca10g02778 | 600 | Gene3D | Ribonuclease Inhibitor | 26 | 215 | IPR032675 | - | |
Seca10g02778 | 600 | Pfam | Protein tyrosine and serine/threonine kinase | 323 | 569 | IPR001245 | GO:0004672|GO:0006468 | |
Seca10g02778 | 600 | Pfam | Leucine Rich Repeat | 100 | 120 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g02778 | Seca-Chr10 | 35873448 | 35875250 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g02778 | 25 | 598 | Receptor kinase-like Gene Family | AT3G28450 | 65.060 | 0.0 | 775 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xa | Seca10g02778 | PK_Tyr_Ser-Thr | 1.1e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g02778 | - | - | gmx:100810378 | 946.806 |