Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02764 ATGTCTTCTCTGAAATCGATCATTTTCAGAATTATTAAAAATAAGTCTTGTTGCCTAATACTACCATACTTGAACACATATGGTACATTTCTAAATATAGTACAGTTTCATGAAGCTGCAAACGGGAAGGACAATACTCTCACTGTTTCTAAAATCAATGGTGAAGAAGTCCATGTTTGCACCACAAATGGGAAGACAGTTGTCATAAATATCTCAAAAGTTTTTCCCAAGGACGATGAAGCTCCCCCTGGAGGTGTAGATGACATGACAAAACTGTCATACTTGCATGAACCTGGACTTCTGCACAACTTGGCAGCTAGATATGAACTCAATGAAATCTATGCCTATACTGGCGATATCCTGATTGCGATAAACCCATTTCATAGGTTACCACATCTATATGATACTCACATGATGGAACAATATAAAGGGGCTGCATTTGGAGAGTTAAGTCCACGACATAGATATTATTTTTCTTATGGTTCACTTATTATCCTTGAGTTATATATACTCATTTACTTTTATTATTTACCTTAA 537 0.3557 MSSLKSIIFRIIKNKSCCLILPYLNTYGTFLNIVQFHEAANGKDNTLTVSKINGEEVHVCTTNGKTVVINISKVFPKDDEAPPGGVDDMTKLSYLHEPGLLHNLAARYELNEIYAYTGDILIAINPFHRLPHLYDTHMMEQYKGAAFGELSPRHRYYFSYGSLIILELYILIYFYYLP. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02764 178 PANTHER MYOSIN 80 155 - -
Seca10g02764 178 Pfam Myosin head (motor domain) 86 152 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca10g02764 178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 153 IPR027417 -
Seca10g02764 178 ProSiteProfiles Myosin motor domain profile. 84 178 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca10g02764 178 Gene3D Kinesin motor domain 38 159 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02764 Seca-Chr10 35719854 35721025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02764 49 152 Myosins gene family AT1G54560 74.038 8.00e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02764 K10357 - gmx:100777802 198.364