Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02756 ATGTCATCTTTAGACGTTGATTACAAGGCAAGAGTCGGTATGAAATTTGATAGTGTAGAGGTAGCTTGGCAATTTTGGCTTAGATATGGGGCACAAATTGGCTTTGGAGTTCGATTACGATACACAAACAAAAGAAAGCAAGATGGTGCTATTACTTCATGTAGATTTGTTTGTTGCAAGGAGGGGGTGCGAACAACAAACAGTGCTTTGGTTAGCAATCATAGAGCTGCGACTAGAACTGATTGCAAAGCAAGGATGTCACTTATATTGAAGAATGAAAAGCTTGTCCTACATGAGTTTGTAGAGGACCATAACCACCCTCTACAACTTCCAGAGACAACACACATGCTTGCATCACACAGAAAAATAAGTGAAGTCCAAGCATATGAGATTGATCTAGAGGATGACTCTGGATTAAAGCAAAAGTCAGCATTTCAGCTTATGAGCACACATGCAGGGCATAGATCTAATCTTGGATATACACGTTTGGATAATGGTATTAAACACCTTGGCAACTTGATGAAAGGAGGAAGTTATTTTTTAAGAGATTTCAAAAAATGCATGTATGACTTTGACACTAAAGCAGAGTTTGAGACAGCTTGGACCCAGTTGATCTTGGATTATAATGTTCGTGAAAATAATTGGATCAATTGTAGAAAGTTTGAGACATTTGGCATACTCTGTTCACATGCATTGAAAGTATTTGAAGCAAATGATGTTAAGGTTGTTCCTGAGAAGTATATTTTAAAAAGGTGGACAAGAGAAGCTTGCAGCGGCATTGTGCATGATGTAAGGGGAAATGAGGTTGAAGGAGATCCAAAGATATCAAGCACAAGGAGATTTAGGCAACTTGTCTCTAAATTTGTTAAACTGGCAGCCGAGGTGTCCACTTCTGAAGAATGCCATAACATTCTAGACAACGGGGTCGATGCATTGTCAAAGCAAATAACTGAACTTCACTTACAAGCAGGAAACATTAATAGTCATAACAATGATGATTTAGCATTTGTCAGTACATATGCATCTCAGCCAAAGGGATTCAAGCACCGACCTGGTTCAAAGAGACATAAGCGATTAAAAAGTTGGGTTGAGCTTCAATCCAATAGAAGAAAAAGAGCTCCAACTAGAGGACAACCAAACAGCCAAGCATCTCAGGTACATAAGTCAATTTAG 1173 0.3879 MSSLDVDYKARVGMKFDSVEVAWQFWLRYGAQIGFGVRLRYTNKRKQDGAITSCRFVCCKEGVRTTNSALVSNHRAATRTDCKARMSLILKNEKLVLHEFVEDHNHPLQLPETTHMLASHRKISEVQAYEIDLEDDSGLKQKSAFQLMSTHAGHRSNLGYTRLDNGIKHLGNLMKGGSYFLRDFKKCMYDFDTKAEFETAWTQLILDYNVRENNWINCRKFETFGILCSHALKVFEANDVKVVPEKYILKRWTREACSGIVHDVRGNEVEGDPKISSTRRFRQLVSKFVKLAAEVSTSEECHNILDNGVDALSKQITELHLQAGNINSHNNDDLAFVSTYASQPKGFKHRPGSKRHKRLKSWVELQSNRRKRAPTRGQPNSQASQVHKSI. 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02756 390 PANTHER OS01G0519700 PROTEIN 5 160 - -
Seca10g02756 390 Pfam FAR1 DNA-binding domain 24 109 IPR004330 -
Seca10g02756 390 SMART 26again6 218 241 IPR006564 GO:0008270
Seca10g02756 390 MobiDBLite consensus disorder prediction 372 390 - -
Seca10g02756 390 MobiDBLite consensus disorder prediction 364 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02756 Seca-Chr10 35585264 35587424 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g02756 FAR1 3.2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02756 - - cam:101507947 244.202