Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02716 ATGACAAGTCCTGTTGGTGTTGGTGCTAAGACTGGAGGTAGGAATGTGGGAAAAGACAAAGGTGTCAAAGGTGAAGGTTCAGGGTTTTGGATTAAACTCAGGATTTTGTTTGCTTGCATGGCTTTGGGGTCCACAACGGAACATCGCTCCTCAGATGACACTAACAGCAACAATAAACAGGATAATGGAAAGAAACCTTTCACCTTTTATGAGCTCAAGTTGGCAACTAAGAATTTCAAAGATGGGAATTTTCTTGGTGAGGGAGGCTTTGGTACTGTACACAAAGGCTGGATCACTCAAAACGATTGCTCCCCATCAAGACCTGGAGTGGGAATTCCAGTTGCAGTAAAGACCCTTAATATAGAAGGGAATCAGGGTCACAAAGAATGGGTGGCTGAAGTGAGCAATCTAGGGGGAGCATTGCCCCTTCCATGGTCTATGAGACTGAAAGTTCTGATTGGTGCTGCAAAGGGTCTTGCTTTTCTGCATGAGGAAGCTAAAAAGCCATTGATTTATCGAGACTTCAAAACTTCTAATATCCTATTGGATTCGGATTACAATGCGAAACTTTCTGATTTTGGGCTGGTGAAAGATGCTCCAACAGGTGACTTGACTCATGTGTCAACTAGAGTGATGGGTACTCAAGGGTATGCAGCCCCTGAGTATGTGATGACAGGGCACTTGAGTTCAAAGAGTGATGTGTATAGCTTTGGAGTGGTATTGCTTGAGATATTGACAGGGAGAAGGACGATTGATAAGAAGAGGCCAGTAGCGGAGCATCATTTGGTGGAATGGGCAAGGCCTAAAAAAAACATGGAGGAGGAGCACAATACCAACAATTAA 843 0.4401 MTSPVGVGAKTGGRNVGKDKGVKGEGSGFWIKLRILFACMALGSTTEHRSSDDTNSNNKQDNGKKPFTFYELKLATKNFKDGNFLGEGGFGTVHKGWITQNDCSPSRPGVGIPVAVKTLNIEGNQGHKEWVAEVSNLGGALPLPWSMRLKVLIGAAKGLAFLHEEAKKPLIYRDFKTSNILLDSDYNAKLSDFGLVKDAPTGDLTHVSTRVMGTQGYAAPEYVMTGHLSSKSDVYSFGVVLLEILTGRRTIDKKRPVAEHHLVEWARPKKNMEEEHNTNN. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02716 280 ProSitePatterns Protein kinases ATP-binding region signature. 85 117 IPR017441 GO:0005524
Seca10g02716 280 PANTHER OS01G0588500 PROTEIN-RELATED 61 138 - -
Seca10g02716 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Seca10g02716 280 ProSiteProfiles Protein kinase domain profile. 1 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02716 280 Gene3D Phosphorylase Kinase; domain 1 49 137 - -
Seca10g02716 280 SUPERFAMILY Protein kinase-like (PK-like) 65 268 IPR011009 -
Seca10g02716 280 Gene3D Transferase(Phosphotransferase) domain 1 138 280 - -
Seca10g02716 280 Pfam Protein kinase domain 155 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02716 Seca-Chr10 34857256 34858838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02716 49 268 Glycoside Hydrolase AT3G07070 44.195 2.36e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca10g02716 Pkinase 1.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02716 - - gra:105798258 317.005