Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g02713 | ATGAGACTGAAAATTCTGATTGGTGCTGCAAAGGGTCTTACTTTTCTGCATGAGGAAGCTAAAAAGCCATTGATTCATCGAGACTTCAAAACTTCTAATATCCTATTGGATTCGGACTACAATGTGAAACTTTCTGATTTTGGGCTAGTGAAAGATGCCCCGGCGGGTGACCTGACTCATGTGTCAACTAGAGTGATGGGTACTCAAGGGTATGCAGCCCTTGAGTATGTGTGA | 234 | 0.4316 | MRLKILIGAAKGLTFLHEEAKKPLIHRDFKTSNILLDSDYNVKLSDFGLVKDAPAGDLTHVSTRVMGTQGYAALEYV. | 78 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g02713 | 77 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 76 | IPR011009 | - | |
Seca10g02713 | 77 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 77 | - | - | |
Seca10g02713 | 77 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 24 | 36 | IPR008271 | GO:0004672|GO:0006468 | |
Seca10g02713 | 77 | ProSiteProfiles | Protein kinase domain profile. | 1 | 77 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g02713 | 77 | Pfam | Protein kinase domain | 7 | 76 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g02713 | 77 | PANTHER | OS01G0588500 PROTEIN-RELATED | 1 | 77 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g02713 | Seca-Chr10 | 34799741 | 34800063 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g02713 | 2 | 76 | Glycoside Hydrolase | AT3G07070 | 60.000 | 1.72e-27 | 100 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Seca10g02713 | Pkinase | 2.1e-14 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g02713 | - | - | pop:7472558 | 130.183 |