Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02713 ATGAGACTGAAAATTCTGATTGGTGCTGCAAAGGGTCTTACTTTTCTGCATGAGGAAGCTAAAAAGCCATTGATTCATCGAGACTTCAAAACTTCTAATATCCTATTGGATTCGGACTACAATGTGAAACTTTCTGATTTTGGGCTAGTGAAAGATGCCCCGGCGGGTGACCTGACTCATGTGTCAACTAGAGTGATGGGTACTCAAGGGTATGCAGCCCTTGAGTATGTGTGA 234 0.4316 MRLKILIGAAKGLTFLHEEAKKPLIHRDFKTSNILLDSDYNVKLSDFGLVKDAPAGDLTHVSTRVMGTQGYAALEYV. 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02713 77 SUPERFAMILY Protein kinase-like (PK-like) 2 76 IPR011009 -
Seca10g02713 77 Gene3D Transferase(Phosphotransferase) domain 1 1 77 - -
Seca10g02713 77 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Seca10g02713 77 ProSiteProfiles Protein kinase domain profile. 1 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02713 77 Pfam Protein kinase domain 7 76 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02713 77 PANTHER OS01G0588500 PROTEIN-RELATED 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02713 Seca-Chr10 34799741 34800063 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02713 2 76 Glycoside Hydrolase AT3G07070 60.000 1.72e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca10g02713 Pkinase 2.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02713 - - pop:7472558 130.183