Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02709 ATGGCTGGAGTTTATGATCTCATCAAGAATGTATTTCCTGGAAGGCAAGGCTGGAGGTTGAGAGTGAGGGTCGTTCGACTATGGGACATCTTCCCATTGGATGAGCCATCTAAACCTTGGTCGATTGAGATGATATTGCTGGACAATGAGGGTGGCAAGATTCAGGCCTTAATCCGAAGGCCTTTGATGAGGAGGTTCAGGGATGAGTTCTCAGAGGGGGAAACATACAAAATGCAGTTTTTTGGTGTTGTGCGTAACATGGGTTCCTTCCGCGCCACTAGGCATGAATACCATCTGTTGTTCCACGCCAAGACTAAGCTTGCAAGGGTGGACAATGTCAGCATTCCGCGTTTTGGGTTCACATTCACTAATTCCACGGGGGTGCTAGATGCCGATGGCCAGAGTGACTTCCTAATTGACACTATAGGTCTCTTAACTGCTGTTTTCCCTGAGAGGAGATCAATCCGTGATGGCAAAATGACTTGGGTTATTCAACTTGAGCCGACTGATGACAAAGGAAAGATGCAATGTGCATTGTTCAAAAACTATGTTGACATTGTTAATGAACAAGTTCGGTCCATTGGGAGTGAGTTGTCGGTGGTCATTGTTCAGTTGGTCAAGGTCAAACACTTTCGAGGGGAAATTGTCCTTCAAAATGTGCTTATGACCACTAGGATCTTATTTAATCCGGAGACTTCAGAGGTGGAGCAATTTAAGAACAGGGTTGTTCGTCATGGTATCAATTTGTATGCCTCGATGAGAACTATTGAGGACAATCTTGCTCAGATACCTCCATATGATTAG 804 0.449 MAGVYDLIKNVFPGRQGWRLRVRVVRLWDIFPLDEPSKPWSIEMILLDNEGGKIQALIRRPLMRRFRDEFSEGETYKMQFFGVVRNMGSFRATRHEYHLLFHAKTKLARVDNVSIPRFGFTFTNSTGVLDADGQSDFLIDTIGLLTAVFPERRSIRDGKMTWVIQLEPTDDKGKMQCALFKNYVDIVNEQVRSIGSELSVVIVQLVKVKHFRGEIVLQNVLMTTRILFNPETSEVEQFKNRVVRHGINLYASMRTIEDNLAQIPPYD. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02709 267 Gene3D - 114 250 IPR012340 -
Seca10g02709 267 CDD RPA1_DBD_A_like 19 106 - -
Seca10g02709 267 Gene3D - 5 109 IPR012340 -
Seca10g02709 267 SUPERFAMILY Nucleic acid-binding proteins 132 243 IPR012340 -
Seca10g02709 267 Pfam Domain of unknown function DUF223 43 131 IPR003871 -
Seca10g02709 267 SUPERFAMILY Nucleic acid-binding proteins 6 113 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02709 Seca-Chr10 34756860 34758252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02709 12 246 Core DNA Replication Machinery Family AT4G19130 19.835 9.97e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02709 - - lja:Lj6g3v0884310.1 217.238