Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02697 ATGAGGGTAGACAGAAAAAGGGCTCACAGACCAATCACACGAACTAAATGCGAAGCTAGGTTGCGGGTACACTTTGATTATAGATCCTCAAAATGGAAAGTGGTTGCATTTGAGGAGTCTCATAATCATGAGCTTACCCCTCCCAAATACATACACTTAATTTCTGCATACCGTGAGTTGAGTGACGGAGATAAGGCTCAGGCTCAAAGCTTACACTCTTATGGTGTTAGAACCTGTCATATAATGGGATTCATGTTGGCTCAAAAGGGGGGGTACGCTGGCCTTGGTTTTAACAAGAAGGATTTGCAAAACTACTTGGATGAGCAAAAGCGTGGTAGGATAAAAAATGGGGATGCCCAGGCTGCCTTAAGCTATTTAGTAGGTAAGGCTGACAATAATCGCACTATGTTTTGTAGAGCCACAATTACAAATGATGGTAAATTGAATAACCTTTTTTGGGCTGATGCAACTAGTAGAGCTGATTTTCAGTGTTTTGGAGATGTTCTTGCATTCGATGCAACATACAAGAAGAATAGATACAATAAGCCATTGGTTATTTTCTCTGCTGCAATCATCACTTGCAGACCATAA 591 0.4095 MRVDRKRAHRPITRTKCEARLRVHFDYRSSKWKVVAFEESHNHELTPPKYIHLISAYRELSDGDKAQAQSLHSYGVRTCHIMGFMLAQKGGYAGLGFNKKDLQNYLDEQKRGRIKNGDAQAALSYLVGKADNNRTMFCRATITNDGKLNNLFWADATSRADFQCFGDVLAFDATYKKNRYNKPLVIFSAAIITCRP. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02697 196 PANTHER OS01G0519700 PROTEIN 3 194 - -
Seca10g02697 196 Pfam FAR1 DNA-binding domain 5 46 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02697 Seca-Chr10 34310327 34310917 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g02697 FAR1 1.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02697 - - ccaj:109792835 263.848