Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02683 ATGTCTCTTGAAATTGATTCAGAGGATCAAGATGCTTTTGAATTTTATAGTAATTATGCTAAATTAGTTGGGGTTTCGGTAAGGAAAGACGACATCTATTGTGATGATTGGTATAGGATTGTTATGAGAAACATGGTATGTAATAGGCAAAGTGAGAGGCAAAGGAAGAACATGAGTCGTGAACCAAGGGCCATAACCCGCACACGTTGTCAAGCAAGGCTCCGTGTTCGTTTAGGTTACATGAGTGGAAAATGGACAGTTACTCATTTTGAGCCCAAGCATAATCATGACTTGACCCCATCAACATATGTCCATTTGATTCCTGCTTATAAAGGTCTTACTGACGATGGTAAGGCTCAAGTGAATAGTTTGCACATGTATGGTGTTCGTACTTGTCATATTTTGGGTTTCATATTAGGTCAAAAAGGGGGTATGTGTTAG 441 0.3923 MSLEIDSEDQDAFEFYSNYAKLVGVSVRKDDIYCDDWYRIVMRNMVCNRQSERQRKNMSREPRAITRTRCQARLRVRLGYMSGKWTVTHFEPKHNHDLTPSTYVHLIPAYKGLTDDGKAQVNSLHMYGVRTCHILGFILGQKGGMC. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02683 146 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 143 - -
Seca10g02683 146 Pfam FAR1 DNA-binding domain 14 99 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02683 Seca-Chr10 33995456 34002699 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g02683 FAR1 1.9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02683 - - ccaj:109792835 156.762