Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02679 ATGGCCTCAAAAATCAGAAGTTCTACCATTCACGTAGCTCTTATAGTTGCTTTTCTCACAACCAATGTTGTTTTATCTGATGACAATGTACCAATTCCTGATGGAAAGTCTCAATTAAACGCCTGGTTTAATAAAAATGTGGCGCCCTTTGCTCAAAGAAAGAGCACCTTAGACCCTGCATTGGTGACTGCAGAGAATGGTGCTAAGGTTGTGAAGGTCATGCAAGATGGCAGTGGAGATTTCAAGACCATCACTGATGCCATTAATAGCATACCTAATGGGAATACCAAGCGTGTGATTTTATACATTGGAGGTGCAAATTATCATGAGAAAATCAAAATTGAAAGGACAAAACCTTTTGTCACCTTGTATGGGGAACCACACAACATGCCAAACTTGACATATGGTGGTACTGCACAACAATATGGCACTGTTGACAGTGCTACATTGATTGTTGAATCAGATTACTTCGTGGCTGCTAACATCGTCATCTCGAATTCTGCACAAAGACCTAATGGAAAAAAGGATTTATTTTATGATGCAGAACACCGAATTGAAAGTACTTGGCGACAGTGGGATGATTGTGATAGTGGCACAAGCAAGAAAAATGATGAAGAGGATAATGTCTACTCATTTGTGCATTGCGATATTACTGGAACTGGATCAGGCACATTCTTGGGTAGAGCATGGTTTTCTCATTCCAAAGTGGTCTATGCTTACACCACTATGAGCAATATTGTGAATCCAGCAGGGTGA 756 0.4034 MASKIRSSTIHVALIVAFLTTNVVLSDDNVPIPDGKSQLNAWFNKNVAPFAQRKSTLDPALVTAENGAKVVKVMQDGSGDFKTITDAINSIPNGNTKRVILYIGGANYHEKIKIERTKPFVTLYGEPHNMPNLTYGGTAQQYGTVDSATLIVESDYFVAANIVISNSAQRPNGKKDLFYDAEHRIESTWRQWDDCDSGTSKKNDEEDNVYSFVHCDITGTGSGTFLGRAWFSHSKVVYAYTTMSNIVNPAG. 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02679 251 Gene3D - 194 251 IPR012334 -
Seca10g02679 251 Pfam Pectinesterase 71 168 IPR000070 GO:0030599|GO:0042545
Seca10g02679 251 SUPERFAMILY Pectin lyase-like 68 251 IPR011050 -
Seca10g02679 251 Gene3D - 21 183 IPR012334 -
Seca10g02679 251 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 200 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02679 Seca-Chr10 33959040 33960236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02679 9 251 Carbohydrate Esterase AT1G69940 44.407 1.40e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02679 K01051 - gmx:100786427 298.516