Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g02656 | ATGGAAGGATCATCATGTGTGAGAAAAGGCGCATGGAGTAAAATGGAAGATGACCTTCTCAGGGCTTGTGTACTGCAATATGGGGAAGGAAAATGGCACCTAGTGCCCACAAGATCAGGCTTGAACAGATGCCGGAAAAGTTGTAGATTGCGATGGTTGAATTATCTAAAACCAAGCATCAACAGGGGAGAGTTCACCGAAGATGAAGTTGACATGATGAAAAGATTGCATAGACTTTTGGGAAACAGATGGTCCCTAATTGCTGGAAGACTTCCTGGAAGAACTCCAAATGATGTGAAAAACTATTGGAATACATATGTTCGCAAAAATGTATCCTTTGATAAGGGATCAGCAAAACCAAAGGAAAGTACTGTGAAACCTCATGTAGTGATAAAGCCTCGGCCTCGAACTTTGTCAGGAAGGATAGATCAAAGTGGGGCCCCTAATCAAGCATGTGCAACTTCATCAAAGTGCAATATTAATAATAACAACTCTAAAGAAGATCAGTGGTGGGGAACTATTATGGATGACGTTAACAAAGATAAACCAGAGAATGAGGATGGGTACCTTAAAGACTTTCTTTTAGAAGGTGAAAGTTGGAGTGATTTTCTTCTTGATATCAATTTATGGGATTAA | 636 | 0.3994 | MEGSSCVRKGAWSKMEDDLLRACVLQYGEGKWHLVPTRSGLNRCRKSCRLRWLNYLKPSINRGEFTEDEVDMMKRLHRLLGNRWSLIAGRLPGRTPNDVKNYWNTYVRKNVSFDKGSAKPKESTVKPHVVIKPRPRTLSGRIDQSGAPNQACATSSKCNINNNNSKEDQWWGTIMDDVNKDKPENEDGYLKDFLLEGESWSDFLLDINLWD. | 212 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g02656 | 211 | ProSiteProfiles | Myb-like domain profile. | 4 | 56 | IPR001005 | - | |
Seca10g02656 | 211 | FunFam | Myb transcription factor | 9 | 61 | - | - | |
Seca10g02656 | 211 | Pfam | Myb-like DNA-binding domain | 9 | 56 | IPR001005 | - | |
Seca10g02656 | 211 | Pfam | Myb-like DNA-binding domain | 62 | 106 | IPR001005 | - | |
Seca10g02656 | 211 | ProSiteProfiles | Myb-like domain profile. | 57 | 107 | IPR001005 | - | |
Seca10g02656 | 211 | Gene3D | - | 9 | 61 | - | - | |
Seca10g02656 | 211 | SMART | sant | 8 | 58 | IPR001005 | - | |
Seca10g02656 | 211 | SMART | sant | 61 | 109 | IPR001005 | - | |
Seca10g02656 | 211 | CDD | SANT | 64 | 107 | IPR001005 | - | |
Seca10g02656 | 211 | Gene3D | - | 63 | 129 | - | - | |
Seca10g02656 | 211 | SUPERFAMILY | Homeodomain-like | 8 | 103 | IPR009057 | - | |
Seca10g02656 | 211 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 57 | 111 | IPR017930 | - | |
Seca10g02656 | 211 | CDD | SANT | 11 | 56 | IPR001005 | - | |
Seca10g02656 | 211 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 7 | 164 | - | - | |
Seca10g02656 | 211 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 7 | 56 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g02656 | Seca-Chr10 | 33511350 | 33512667 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g02656 | 2 | 176 | MYB Transcription Factor Family | AT1G66370 | 46.635 | 5.09e-56 | 176 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Seca10g02656 | Myb_DNA-binding | 1.8e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g02656 | - | K16166 | cam:101494325 | 262.692 |