Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02651 ATGGTAGCGTTAGTATTGACTGTGTCACAAGACGGAACCGGACAGTACCGGACGGTGCAGGAAGCCATTGATGCAGTGCCACTCGACAACACTCGTCGAACGATGATTCGGGTGTCGCCGGGAATCTACCGGCAGCCACTGTACGTGGCCAAGACCAAGAACTTCATCACCCTCGTTGGTGTGCGCCCTGAGGACACTGTTCTTACATGGAACAACACTGCCACCAGAATCAATAACCACCAGGATGCTCGGGTGATAGGGACTGGCACTTTTGGTTGTGGCAGCACCATTGTGGAAGGAGGGGAATTTATTGCTGAGAATATTGCGTTTGAGAATTCTTCCCCTGAGTCTTTTTCCTGGCAGGGTTCAGGGCAAGCAGTGGCTGTTAGAGTAACAGCAGATCGATGTGCATTCTATAATTGCAGATTCCTTGGATGGCAGGACACATTGTATTTACATTATGGAAAACAATATTTGAAAGATTGTTATATTGAAGGAAGTGTGGACTTTATTTTTGGTAATAGCACCGTGCTCTTGGAGCATTGTCACATCCACTGCAAGTCTGCAGGGTTCATAACTGCACAGAGCAGAAAATCTCCACAGGAAACAACTGGTTATGTATTTCTGAGATGTGTCATCACAGGTAATGGAGGAACATCATATACATATCTAGGAAGACCATGGGGACCTTTTGGAAGAGTGGTCTTTGCATTCACTTACATGGATCAATGCATAAAGCCTGCTGGCTGGAATAATTGGGGGAAAACTGAGAATGAAAAAACTGCTTGTTTCTATGAATACAGGTGTTTTGGACCGGGTTGGTGTCCATCCAAACGAGTAAAATGGGCTAAAGAATTAGCGGATAAAGAAGCAGAGCAGTTTCTCATGCATCGTTTCATTGATCCACAATCAGAGAGACCTTGGCTTGCTCAAAAAATGGCCTCAAGGATTCCTCATTCTGCTTAG 966 0.4545 MVALVLTVSQDGTGQYRTVQEAIDAVPLDNTRRTMIRVSPGIYRQPLYVAKTKNFITLVGVRPEDTVLTWNNTATRINNHQDARVIGTGTFGCGSTIVEGGEFIAENIAFENSSPESFSWQGSGQAVAVRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTVLLEHCHIHCKSAGFITAQSRKSPQETTGYVFLRCVITGNGGTSYTYLGRPWGPFGRVVFAFTYMDQCIKPAGWNNWGKTENEKTACFYEYRCFGPGWCPSKRVKWAKELADKEAEQFLMHRFIDPQSERPWLAQKMASRIPHSA. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02651 321 Pfam Pectinesterase 7 301 IPR000070 GO:0030599|GO:0042545
Seca10g02651 321 SUPERFAMILY Pectin lyase-like 2 308 IPR011050 -
Seca10g02651 321 ProSitePatterns Pectinesterase signature 2. 164 173 IPR033131 -
Seca10g02651 321 Gene3D - 2 315 IPR012334 -
Seca10g02651 321 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 309 - -
Seca10g02651 321 FunFam Pectinesterase 2 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02651 Seca-Chr10 33371448 33379760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02651 5 314 Carbohydrate Esterase AT5G47500 37.580 9.83e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02651 K01051 - gmx:100810259 597.43