Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02637 ATGGAAAATTGGAAAGTGGTGTTGGTTAGTGTTGTGATGATAGGATGGCTTTCATTAGTGGTCATGGGATTGGGAGGTCCAAAGCTTCATAAGGTGGGAGGCTCCAAAGGTTGGCATCCTGATGTCAACTATACTCAATGGTCTGCTCAAGAGCATGTCTATGTTGGTGATTGGCTCTTGTTCAGGTTTGACATAAAATTATACAACGTTCTGGAAGTGAACAAGACAAGCTATGAGAAGTGCATAGACAGGGAATTTATAAAAAACATGACACGTGGTGGCCGTGACGTGGTTGAATTGAGAGAAGAAAAGACATATTACTACCTCTCCAGTGGAGGCTATTGTTTTCATGGAATGAGGGTTGCTGTGCACGTTCAACAACACCAACACCAATTACTACCAGTACTTGCACCAGCACTAGCATTAGCTTCAGCATCAGCACCATCTCCCACCCTCACTATGGTTTCTTCTAGTGGTTCTCTTTTGCCCACCTGCATTTGGATTATTATTATTATTGCTAATATGCTTTATGTCAATTTACTTTCAATGAGCACTTTCTAA 561 0.4153 MENWKVVLVSVVMIGWLSLVVMGLGGPKLHKVGGSKGWHPDVNYTQWSAQEHVYVGDWLLFRFDIKLYNVLEVNKTSYEKCIDREFIKNMTRGGRDVVELREEKTYYYLSSGGYCFHGMRVAVHVQQHQHQLLPVLAPALALASASAPSPTLTMVSSSGSLLPTCIWIIIIIANMLYVNLLSMSTF. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02637 186 ProSiteProfiles Phytocyanin domain profile. 28 127 IPR003245 GO:0009055
Seca10g02637 186 FunFam Lamin-like protein 26 128 - -
Seca10g02637 186 Gene3D - 28 134 IPR008972 -
Seca10g02637 186 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
Seca10g02637 186 PANTHER BLUE COPPER PROTEIN 29 130 IPR039391 GO:0009055
Seca10g02637 186 Pfam Plastocyanin-like domain 40 119 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02637 Seca-Chr10 33099699 33102055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02637 4 162 Phytocyanin Superfamily AT2G27035 36.875 2.23e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02637 - - gmx:100788336 211.46