Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02584 ATGGCGCAAGTTGAGAAAGGTGGTGGGGACAGAGAAAAGAGTCATGTTTCAACGCCAATGAACAATTTCCCGAGAGATCTGTTGAAGAGATTCAACTCCGTTGATCACTTGCATGTGAAGCTAAGAGACGATGCTGATGCAGCAGAAGAGGTTGAACTAACTCTTGGTCTTTCTTCCAATGGTCGTTTTGGGGTTGACCCAAATGCGAAGAAAATCAAGCGAGCATCTTCAATACCAGAGTTTGTGAATGTGGTGCCAATGGCTTGCACGCAGCTTATGAGGACTTGCTCTCTCCCTACAGAGACAGAGGAGGAGTGGAGGAAGAGGAAGGAATTGCAGATGCTGAGGAGAATGGAAGCTAGGAGAAAGCGCTATGAAAAGCAGAAGAACTTGAAGGCGTTAAGGGAACGAAATCGAGGTTTATCAGAAGAGGTTGTTGTTGTTGAGGGGAATCATCAAGCAGAGAAGGACGCAGGGGTAGCCACTTTGAATGAGTTTAGTACCCCAAGTTGTGGAGTTCGATTGAGTGGAGAGAAAGGAAGTGGTTCTCAGAGGATCTCAGAATCTGAGTGTCAACCAGATCAAGGAACAAAATCCTGGGATGCTAGAAGCCCTGTTGGTGCCAACTCATTACTAGATAGTGAACAGAAATTACCAGCCACATCAGGAACAAGTACCACAGAAAGCTCAATCAAAATTGCTGCACTAACAATGAGTAACAAGTCTAACAATGTTGTATCAACTGCAAATAGAACCAATGACATTGGAAGGAACATGTTGGAGGACATGCCTTGTGTGTCCACCAAAGGGGAGGGCCCCAATGGAAAAAGGATAGAAGGTTTTCTTTACAGGTATAGGAAAGGTGAGGAAGTGAGGATACTGTGTGTTTGTCATGGCAGTTTTCTCACCCCTGCTGAGTTTGTCAAGCATGCTGGTGGCGGTGATGTGGCACACCCATTGAAGCATATTGTTGTTAATCCTAGCTTGTTCTAA 993 0.4522 MAQVEKGGGDREKSHVSTPMNNFPRDLLKRFNSVDHLHVKLRDDADAAEEVELTLGLSSNGRFGVDPNAKKIKRASSIPEFVNVVPMACTQLMRTCSLPTETEEEWRKRKELQMLRRMEARRKRYEKQKNLKALRERNRGLSEEVVVVEGNHQAEKDAGVATLNEFSTPSCGVRLSGEKGSGSQRISESECQPDQGTKSWDARSPVGANSLLDSEQKLPATSGTSTTESSIKIAALTMSNKSNNVVSTANRTNDIGRNMLEDMPCVSTKGEGPNGKRIEGFLYRYRKGEEVRILCVCHGSFLTPAEFVKHAGGGDVAHPLKHIVVNPSLF. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02584 330 MobiDBLite consensus disorder prediction 169 228 - -
Seca10g02584 330 Pfam Ethylene-responsive binding factor-associated repression 47 80 IPR012463 -
Seca10g02584 330 Pfam Tify domain binding domain 291 325 IPR032308 -
Seca10g02584 330 Coils Coil 108 151 - -
Seca10g02584 330 MobiDBLite consensus disorder prediction 1 22 - -
Seca10g02584 330 MobiDBLite consensus disorder prediction 180 228 - -
Seca10g02584 330 Pfam Putative nuclear localisation signal 92 168 IPR032310 -
Seca10g02584 330 PANTHER AFP HOMOLOG 2 23 328 IPR031307 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02584 Seca-Chr10 32326720 32330318 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02584 - - pcin:129304932 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02584 10 32326720 32330318 Seca10g02584 10 32326720 32330318 ECH