Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02583 ATGGCGCAGTCAACATCTCTCAAAGTTCATCAACTTTGTTCTCTCTCACCGCCACATGAAACCACCCAAACCTCTCTTCCCTTCACTTTCTTCGACTCACTCTGGCTAAGACTCCCTCCTGTTGAGCGTCTCTTCTTCTACGAATACCCAAACCCAACCTCTTCCTTCTTTGACTCTGTTCTTCCCAATCTCAAACACTCCCTTTCACTCACTCTCCAACACTTCCCCCTTCTCGCCGGTAACATCATCTGGCCCGCTGAATCACCCCACCCCATCATCAACTACGTCCCTGGCGATGCTGTCCCTTTCACAGTAGCCGAATCCAACGCTGATTTCAACCATCTCTGCTCCAATCTCTGTCAAGTTGACCAAAGACTCCCCTTAATCCCTCGCTTGAAAATTTCCCATGAACAAGCATCTATTTTAGCACTTCAAGTCACTTTTTTCCCAAACTCTGGATTTTGTATTGGGATAACCACACACCACGCAGCTGTTGATGGGAAATCTTCAACTCTGTTTCTAAAAGCATGGGCCTTTATTTGCTCTAACCTTAAAGGGGACCCTTCACACATGTCTCTATCATTACCTGAAAATCTAACACCCTTTTTTGACAGATCAGTGATAAAAGACCCTACAGGGATCAACGAGGTTTATCTGAAGTCGTGGTTGACTTACGGTGGAGAAACCAACAATCGAAGCTTGAAAGTGTGGGAAACGATTAGTGGAACTCAAACAGATGCGGTTAAAGGTTTGTTTGAATTGACCCCTTCACATATCCAAAAGCTTAAGCAACATGCACAATCCAAGGTGAAAAACAAGGTTCGCTTATCAACATTTTCTGTTACATGTGCTTATTTGTTGGCATGCGTGGTGAAAGTAGACCAACCAAAATCGAATAGAGTAGCTTTTGTGTTCAGTGTGGATTGTAGGCCCCGTTTGGAGCCTCCAATTAAGCCAACTTATTTTGGGAATTGCATTGTGTCTCAGTTGGTTGTGGCTGAGACAAGGGCAATATTAGGGGATGATGGATTTATCAATGCCCTTGAGGGGATCACTGATTTGTTGAGTAGTTTGGAGGATGGAGTGCTGAATGAGGCAGAGAATTGGATGACAAAGATACAATCTGTAATGGGTGATAGGCTATTTTCCACTGCAGGGTCACCTCGGTTTGAGGTTTATAGTATTGATTTTGGATGGGGAAGGCCTAAAAAGGTGGATGTAACTTCCATAGACAAAACAGGAGCATTCTCTCTTTCGGAAAGTAGGAACAATGATGGTGGGGTTGAGATTGGGTTGGCGTTGAACAAGCGTCAAATGGAGACTTTTGCTGAACTTTTTGCTCAAGGACTTGAATCCTTGTAA 1362 0.4405 MAQSTSLKVHQLCSLSPPHETTQTSLPFTFFDSLWLRLPPVERLFFYEYPNPTSSFFDSVLPNLKHSLSLTLQHFPLLAGNIIWPAESPHPIINYVPGDAVPFTVAESNADFNHLCSNLCQVDQRLPLIPRLKISHEQASILALQVTFFPNSGFCIGITTHHAAVDGKSSTLFLKAWAFICSNLKGDPSHMSLSLPENLTPFFDRSVIKDPTGINEVYLKSWLTYGGETNNRSLKVWETISGTQTDAVKGLFELTPSHIQKLKQHAQSKVKNKVRLSTFSVTCAYLLACVVKVDQPKSNRVAFVFSVDCRPRLEPPIKPTYFGNCIVSQLVVAETRAILGDDGFINALEGITDLLSSLEDGVLNEAENWMTKIQSVMGDRLFSTAGSPRFEVYSIDFGWGRPKKVDVTSIDKTGAFSLSESRNNDGGVEIGLALNKRQMETFAELFAQGLESL. 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02583 453 PANTHER - 7 452 - -
Seca10g02583 453 SUPERFAMILY CoA-dependent acyltransferases 248 452 - -
Seca10g02583 453 Gene3D - 244 453 IPR023213 -
Seca10g02583 453 Pfam Transferase family 16 444 - -
Seca10g02583 453 Gene3D - 7 234 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02583 Seca-Chr10 32303564 32304925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02583 44 446 Monolignol Biosynthesis Gene Families AT5G48930 25.891 1.25e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02583 - - gmx:100785084 604.749