Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02582 ATGGAGCAATCAAGAGCTGTGAAAGTAGTCCAAGAATGCCAAGTGTCCCCAGCAGAGGAGGGAACAACCTCAATGTCTCTCCCTTTCACATTCTTTGATGTTCTATGGCTAAGAAGTCCACCTGTGGATCGTATTTTCTTCTATGAATACCAAAATTCAACCTCTTCTTTCTTTGACTCTGTTCTTCCCAATCTCAAACACTCCCTTTCACTCACTCTCCAACACTTCCTCCCTCTTGCTGGCAAAATCACTTGGCCCCTTGATTCATCCTTTCCCATCATCAACTATGTCCCTGGTGATGCCATTTCCTTCACTGTAGCTGAGTCCAACTATGATAATTTCAACCATCTATGTTCCAATTTCTGTGAAGTTGTGGAACTCCATCCTTTAATACCCCACTTGCCCACTTCCCATGAACAAGCATCTGTGTTGGCCCTTCAAGTTACCCTGTTTCCAGGCTCTGGCTTTTGCATTGGAATAGCTTCACACCATGCTGTAATGGATGGAAAGTCTTCAATTTTGTTTCTCAAAGCATGGGCCTATGCATGCTCTAAGCTTCTAGAGGAATCATCATTTTTAACATTGCCTGAACATCTAACACCTTTCTATGACAGGTCAATGATAGAAGACACTACAGGAATTGGTGCAAGATATGTGAAAGATTGGTTGAACCTTGGTGGACCAAACAATAGAAGCCTCAAGGTGTTGAATTTTGGTAACACTATATCCAATGAGGCAACTAAAGGTTCATTTGAATTAACCTCCTCACATATTCAAAAGCTTAAGCAACATGCACAATCTGAGCTGAAAATAAATGGCCGGTTATCAACATTTTCAGTTGCATGTGCTTATGTGTCACAATGTTTAGTCAAAACAGAACAACCAAAGACCAAAGGAGTAGCCTTTACATTCAGTGTGGATTGTAGATCTCGCTTGGACCCTCCAATTCCATCCACATATTTTGGAAATTGCATTGTTGGTCATAGGTTTATGGATGAGACACATAAGTTACTAGGAAATGAAGGTTTTATTAATGCTTGTGAGGGGCTGAATGAAGCTTTGAAAAGATTGGAAGATGGAGTGCTGAATGGAGCATTAACTATGTATACACTGATGCAATTTGCAAGGGATAATAGAATCCTCTCCATTGGAGGGTCGCCAAGGTTTGAGGTTTATAGTGTTGATTTTGGGTGGGGAAGGCCCAAGAAGGTAGATATGACTCTTATAGGCGAAACAGCAGCATTTTCTCTCTCGGAGAGTAGAAATGACAGTGGAGGAATTGAGATTGGTTTGGTGTTGAACAAAAGCGAAATGGAAGCTTTCTCTTCTCATTTTTTTCAAGGACTCAAATCCCTTTAA 1359 0.4099 MEQSRAVKVVQECQVSPAEEGTTSMSLPFTFFDVLWLRSPPVDRIFFYEYQNSTSSFFDSVLPNLKHSLSLTLQHFLPLAGKITWPLDSSFPIINYVPGDAISFTVAESNYDNFNHLCSNFCEVVELHPLIPHLPTSHEQASVLALQVTLFPGSGFCIGIASHHAVMDGKSSILFLKAWAYACSKLLEESSFLTLPEHLTPFYDRSMIEDTTGIGARYVKDWLNLGGPNNRSLKVLNFGNTISNEATKGSFELTSSHIQKLKQHAQSELKINGRLSTFSVACAYVSQCLVKTEQPKTKGVAFTFSVDCRSRLDPPIPSTYFGNCIVGHRFMDETHKLLGNEGFINACEGLNEALKRLEDGVLNGALTMYTLMQFARDNRILSIGGSPRFEVYSVDFGWGRPKKVDMTLIGETAAFSLSESRNDSGGIEIGLVLNKSEMEAFSSHFFQGLKSL. 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02582 452 PANTHER - 7 451 - -
Seca10g02582 452 SUPERFAMILY CoA-dependent acyltransferases 274 451 - -
Seca10g02582 452 Pfam Transferase family 7 445 - -
Seca10g02582 452 Gene3D - 2 224 IPR023213 -
Seca10g02582 452 Gene3D - 244 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02582 Seca-Chr10 32278987 32280345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02582 45 447 Monolignol Biosynthesis Gene Families AT5G48930 26.603 3.56e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02582 - - gmx:100785084 653.669