Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02579 ATGATTAATAGTCCAAAAGAAGCAGATTTTCCACTAAAACAGGAAGGTCTTACATGTGATGAAAAAGCAAAAGCTTCATCAAGTTCATCATCAGCACAATGGCTAAAACTGAAGGATCCAAGGATTGTGAGGGTATCCAGAGCCTTTGGAGGTAAAGACAGACACAGCAAGGTATGCACAATAAGAGGACTGAGAGATAGAAGGGTGAGGCTTTCAGTCCCTACAGCCATTCACCTATATGATCTTCAAGACAGGCTAGGACTCAATCAACCTAGCAAAGTTGTTGATTGGTTACTCAATGCAGCTAAGCATGAAATTGATGAACTCCCACCACTGCCAATCCCTCCAGGGAACTTCACCCTTGGTTATCCATCTCTTGCTACTTCTAATGATGTTAGCCAAAACAGTGCTATCTGGAAATCAAAGTCCAAAGATCAAGTTTCAGTAGAAATGGCTACTGAGAAAGAAAATTGGATGAGTAGAAGTGAAGGAGATAAACAAGGAAGCAATGAATGTTCTGGTGCACAACAACATGTTTTGCCAAATAATAATAATAATCTCTTACCAACAAGAGCTAATCATCATCATCATCATCATCCTTCCTTTTTGGGATTGTTGAACACTATGCCACTTGGTTACCAATTGGAGCCTTCATCTGATGTTACTCAATTGGCAAACCTTGGATTTGTGAACCACCAAACAGATATGCACAGCATTAATGTTGTGCCTTTCCCATCCACATTGTCTTTATCAAGTGGGAACACTTCTCAGATCTTGGTGTGTCCTACTGGAGCAACACAGCCATATTTCCCTTCACATGTTGCAGCAATGGAAATGGATCCAAGACAAATCAACCACTTTCAAATGCTGAGTAGTTCAAGTTCTCAAAATCTGTTGACCACCAATTCTCTCATTAATCCATCTCAACAACTCATGAGCCAGTCAGGGAAACCATTCAGCTTGGGTAGGATGACTGCTCCTAAACTCTTACATTCTCCCAATAACAGTGAAAGCCATTCCCATAGAGGCCAGGATTTTCCTTCCAAGTGA 1050 0.4095 MINSPKEADFPLKQEGLTCDEKAKASSSSSSAQWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLATSNDVSQNSAIWKSKSKDQVSVEMATEKENWMSRSEGDKQGSNECSGAQQHVLPNNNNNLLPTRANHHHHHHPSFLGLLNTMPLGYQLEPSSDVTQLANLGFVNHQTDMHSINVVPFPSTLSLSSGNTSQILVCPTGATQPYFPSHVAAMEMDPRQINHFQMLSSSSSQNLLTTNSLINPSQQLMSQSGKPFSLGRMTAPKLLHSPNNSESHSHRGQDFPSK. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02579 349 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 296 IPR005333 GO:0003700
Seca10g02579 349 MobiDBLite consensus disorder prediction 156 199 - -
Seca10g02579 349 MobiDBLite consensus disorder prediction 163 190 - -
Seca10g02579 349 Pfam TCP family transcription factor 51 176 IPR017887 -
Seca10g02579 349 ProSiteProfiles TCP domain profile. 51 109 IPR017887 -
Seca10g02579 349 MobiDBLite consensus disorder prediction 309 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02579 Seca-Chr10 32219237 32222362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02579 16 308 TCP Transcription Factor Family AT3G02150 45.161 8.69e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Seca10g02579 TCP 2.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02579 - - aprc:113867214 453.366