Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02576 ATGGATGACGATGATACTAGTTCAGATGTCAATTGTGATGAATTGAATGAAGACCATAATTCTGAACATGCAATCCAAATTGATGGCGATGAAGACATAATAGGTATAGATTTGGAGAGCTTTAGCCCCCATGATATTTGTAAGTATGATTTTGCTTCTTTGGATGTTGCTAATGGCTTTTATGAGTGGTATGCCAAATCAAATGGGTTTAGTATTCAAAGAGGAAGAATGTTAAGAAGTAAAAAAATTGGTGAGACATTGGGGCAAGATTTTGTCTGTTGTAGACAAGGTGATCGAAAGAAAAATGTTCAAGACAATAAGTGTGAGCCTAAAGCCAATACCAAATGTAATTGTCAAGCTAAATTCCGGGTTCATATTGATAAAGTCACAGGCCGTTGGTATGCTACTTGCTTTAATGATAAACATTCTCATGACCTGTTATTAGTTAGAATCTGTTTTGTTATAATTTGGTCTTCTGTTAGTCATAGTAGTTATTAG 498 0.3454 MDDDDTSSDVNCDELNEDHNSEHAIQIDGDEDIIGIDLESFSPHDICKYDFASLDVANGFYEWYAKSNGFSIQRGRMLRSKKIGETLGQDFVCCRQGDRKKNVQDNKCEPKANTKCNCQAKFRVHIDKVTGRWYATCFNDKHSHDLLLVRICFVIIWSSVSHSSY. 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02576 165 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 147 - -
Seca10g02576 165 Pfam FAR1 DNA-binding domain 60 147 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02576 Seca-Chr10 32197244 32197741 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g02576 FAR1 5.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02576 - - tpra:123913749 114.775