Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02575 ATGTCTAAAAAGGTTTTGACATCCATGAAGGATGAAAATCCAGATTTGCAGAAGCAGATGGGGTGCATCAGTGGGTTTTTTCAGCTGTTTGACCGCCACCGGTTCCTCACAGGCCAACGCAGTAGCAGCCACACTCGAGGTGGTACCAGTAATCACATCAAAGAGTTGAATAATACAACACAAAAGGCAACGGCAAAGAATGTGAAGGTTGCAAGAGAGAATTTACAATTCTCCACAGAATCATCAGGAACTTCAATGTCATCATCATCTTGTTCATCTAGCATGTCATCACTCGACTTTAACAGAACAATTCAGATAGAACCACCATCAATCAGTCAAATCAAAATCCCAGAAAACTCCAATTCAGGCGCAGCAATGAAGCAACCTAGCAAACCAAGACATGAGTCCCTTGATTTCTATGATATTGTCAAAGACTCAATGCATAGAGATGCCCAAGGTTTGTCAGTAAAAACTGTGGCTAAAGAGGAAAAGAAGGGTCGTATCTTGAAACACATTGACTCTCCCCGGCCTTTGCAGGCCCCCAAATCTGTCAATACAGGAGTTATGGTTGCTTGGGATTCACCACGACTCTCCTATGATGGGAGGGATATACAAGATACATTCAAATCTGCTACAAAGCACAAGGAACTGCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAAAGTTTCAAGGAAGGAACAAAATCTCGCAACCTTTTGAAGGGTCCAGAGAAAGGGTATGGGGGCTCCAGCACAATGCTTAAGCAGCTGCAAGAACCAGAAACTTCTAAAAGACCATCCAGTGTTGTAGCAAAGTTAATGGGACTGGAATCCTTTCCAGAATCAACCCAAACTTGTGATACTCCACAGGGAATCTCTAGCTGCACTACCAACAAAAATGAGACCTTTGCAGGATCTAGGATAAGTGATGAATACAAGCAACACCAAAGTTCAGTATCCCCAAGGACAAGCAAGGGGTCTACCTTGCTTCAGTCTAGGAGGGATGCTTCAATCACAAATGTGACACCATATTCACGATTTTCGCTGGAACCAACTCCATGGAGGCAAACTGATACAAGCCAAGGTTCACAATCACAGGCTTCCCAGAGAAATGAATCTTCAGCAAGAGCATCAAACCCATCCCTCTCTGTATATGGGGAAATTGAGAAAAGGATGGCAGATCTAGAGTTCAAAAAATCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTAGAAGCTATGCAGAGATATAAAGAATCATTGGATATTACAAGAGATCAGGCTTCCAATTCTCCATCTGACAGTACTCTCAGTGAAAGCTTGAAAGTACAAAGCCCAAGAATACGACAGAAGGACCCAACATCTGCCACTGTTGAGATGTCAAATTCAACCCAGGGTAATAAATCACCAATTGTCATCATGAAACCAGCCAGAGTTGCAAGAAAAACCAACAATTCTGCTTCCACAGAAATGTCAATTCATGGTAAATCAGGCCCCAGTAAGTTTTGTCCTAGTAGTCCCACAAATAGAATATTGGTTGACAAGCTTGACAGGCAAACAGCAAAAGATAGTCCAGCAATGAGACATGTCAAGGATCCTATTAGTCAGCCCTTTCATTCAGTGGATAAGAGTAATAAGATGAGAACTTCAAAACGGATGCAATCCTCAAAAGTTCCTCAAGTCATCAATGGAGAAAATAGCACCAACTCCAGCAATATAGCAGAGACAAGGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCTCCACCAACAAGCCCATCATCAGATTCCAGCAGTAACAGAAGACAACACAATAGGCAATCAATGGAATTGTCTTCCCCAAGTACAACACCCAGACAAAAATTCTCTACTTTGCAGGATAGGAATGAACGTTTCAGTGAGATCAGCTATCAAAGGATGAATTTTAAGAATGAAGTTGATGTTATTTTGCCAGATTTTGACAGCATGAGAAGCATTGACTCTCACAGTGATATAGAAGCCATTCACATTGATCATTCTGAAAAGATCAATAGCAACTCCATCCAGCTAAAAGGCCAGAATCAAACTGTAAGTATTTATTCCTCCAATAATTGGATTTTTGCATCTAAATCACCTGGTTTAACATTCTTTCATTGA 2151 0.417 MSKKVLTSMKDENPDLQKQMGCISGFFQLFDRHRFLTGQRSSSHTRGGTSNHIKELNNTTQKATAKNVKVARENLQFSTESSGTSMSSSSCSSSMSSLDFNRTIQIEPPSISQIKIPENSNSGAAMKQPSKPRHESLDFYDIVKDSMHRDAQGLSVKTVAKEEKKGRILKHIDSPRPLQAPKSVNTGVMVAWDSPRLSYDGRDIQDTFKSATKHKELPRLSLDSREGSIKSFKEGTKSRNLLKGPEKGYGGSSTMLKQLQEPETSKRPSSVVAKLMGLESFPESTQTCDTPQGISSCTTNKNETFAGSRISDEYKQHQSSVSPRTSKGSTLLQSRRDASITNVTPYSRFSLEPTPWRQTDTSQGSQSQASQRNESSARASNPSLSVYGEIEKRMADLEFKKSGKDLRALKQILEAMQRYKESLDITRDQASNSPSDSTLSESLKVQSPRIRQKDPTSATVEMSNSTQGNKSPIVIMKPARVARKTNNSASTEMSIHGKSGPSKFCPSSPTNRILVDKLDRQTAKDSPAMRHVKDPISQPFHSVDKSNKMRTSKRMQSSKVPQVINGENSTNSSNIAETRSPRLQKKFGLERRSPPTSPSSDSSSNRRQHNRQSMELSSPSTTPRQKFSTLQDRNERFSEISYQRMNFKNEVDVILPDFDSMRSIDSHSDIEAIHIDHSEKINSNSIQLKGQNQTVSIYSSNNWIFASKSPGLTFFH. 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02575 716 MobiDBLite consensus disorder prediction 114 133 - -
Seca10g02575 716 MobiDBLite consensus disorder prediction 553 580 - -
Seca10g02575 716 MobiDBLite consensus disorder prediction 484 633 - -
Seca10g02575 716 Coils Coil 53 73 - -
Seca10g02575 716 MobiDBLite consensus disorder prediction 228 268 - -
Seca10g02575 716 MobiDBLite consensus disorder prediction 593 628 - -
Seca10g02575 716 MobiDBLite consensus disorder prediction 424 470 - -
Seca10g02575 716 MobiDBLite consensus disorder prediction 253 267 - -
Seca10g02575 716 MobiDBLite consensus disorder prediction 308 383 - -
Seca10g02575 716 MobiDBLite consensus disorder prediction 484 509 - -
Seca10g02575 716 MobiDBLite consensus disorder prediction 426 470 - -
Seca10g02575 716 MobiDBLite consensus disorder prediction 308 385 - -
Seca10g02575 716 Coils Coil 409 429 - -
Seca10g02575 716 PANTHER LONGIFOLIA PROTEIN 1 685 IPR033334 GO:0051513
Seca10g02575 716 MobiDBLite consensus disorder prediction 517 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02575 Seca-Chr10 32182528 32186991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02575 134 641 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 35.897 1.09e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02575 - - aprc:113867263 989.178