Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02560 ATGGTGGAGTGTGGACCAAATAATCGAAGTCTCAAGGTGTGGGACTCCCTTAATGCAATACAGGCTGATGGAATGAAAGGTTTGTTTGAATTTACACCCTCACATATCCAAAAGCTTAAGCAATATGCACACTCTAAGCTGAAAAAGAAGGATCACATATCAGCATTTTCAGTGACACGTGCTTATGTGTTGGCATGCTTAGTCAAAGCACAACAACCAAAGGCCAATAAATTGGTTTTCATATTTAGTGTGGACTGTAGATCCCGCTTGGACCCTCCAATTCAGCCAACATATTTTGGAAATTGCATTGTAGGGCAAAAGGTTGTGGCTGAGACAAAGAACTTACTAGAAAATGATGGATTCATTAGTGCTTTGGAAGGGATAATTAAAGCTTTGAATAGGTTGAAGGATGAAGTGCTAAATGGAATTGAAACTTGGATTTCAACTATTTTCAATGTAATTGAGGACAAAATATTCGCTACTGCTGGATCCCCAAGGTTTGAGGTTTATAGTGTTGATTTTGGATGGGGAAGGCCTAAAAAGGTGGATGTCACTTCCATAGACAAAAAAGAAGCATTCTCTCTTTCGGAGAGTAGGAACAATGATGGTGGAATTGAGATTGGGTTGGTGCTAAGCTAG 639 0.3959 MVECGPNNRSLKVWDSLNAIQADGMKGLFEFTPSHIQKLKQYAHSKLKKKDHISAFSVTRAYVLACLVKAQQPKANKLVFIFSVDCRSRLDPPIQPTYFGNCIVGQKVVAETKNLLENDGFISALEGIIKALNRLKDEVLNGIETWISTIFNVIEDKIFATAGSPRFEVYSVDFGWGRPKKVDVTSIDKKEAFSLSESRNNDGGIEIGLVLS. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02560 212 PANTHER - 24 211 - -
Seca10g02560 212 SUPERFAMILY CoA-dependent acyltransferases 38 187 - -
Seca10g02560 212 Gene3D - 22 212 IPR023213 -
Seca10g02560 212 Pfam Transferase family 31 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02560 Seca-Chr10 31954636 31955274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02560 54 211 Monolignol Biosynthesis Gene Families AT5G48930 25.595 5.43e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02560 - - lja:Lj0g3v0308229.1 278.485