Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02559 ATGACGCAAACTGCACCTTTCAAAGTTGTTCAAGTTTGCAGTGTGGCACCGCTACAAGGAACTCCAACCTCTCTTCCACTCACTTTCTTTGACCTTTTATGGCTGAGATTTCCACCTGTTGAGCGTCTCTTCTTCTATGAATACCAAAACTCAACCTCTTCTTTCTTTGACTCTGTTCTTCCCAATCTCAAACACTCCCTTTCTCTCACTCTCCAACACTTCCTCCCTCTTGCTGGTAACTTCACTTGGCCCCATGACTCTTCCAAACCCTTCATCCAATATGTCCCTGGCGATGCTGTCTCCTTCACCGTTGCTGAATCCAATGCCAGCTTCACCCATCTTTGTTCTGATCTCTGTGAAGCTGCACAACGATATCCCCTCATACCCCACTTGACCACTTCCCATGAACGAGCTTCTGTGATAGCACTTCAAGTCACTCTGTTTCCAAACTCTGGCTTTTGCATAGGAATAACCACACACCATGCGGCTTTTGATGGAAAGTCTTCAACTTCGTTTATGAAATCATGGGCCTATACATGCTCTAAGCTCGGAGAATCACCATCTTTATCATCATTACCTGAGAATCTAACACCTTTCTTTGACAGATCAGTGATCAGAGACCCTGCAGGGATAGATGAACTGTACTCAGAGGCATGGTTGAAGCATGGTGGACCAAATAATCGAAGTCTCAAGGTGTGGGACTCCCTTAATGCAATACAGACCGATGCAATGAAAGGTTTGTTTGAATTAACACCCTCACATATCCAAAGGCTTAAGCAATATGCACACTCTGTGCTGAAAAAGAAGGATCACATATCAACATTTTCAGTGACATGTGCTTATGTATTGGCATGCTTAGTCAAAGCACAACAACCAAAGTGCAATAGGTTGGTTTTCGTATTTAGTGTGGACTGCAGATCCCGCTTGGACCCTCCAATTCAGCCAGCATATTTCGGAAATTGTGTTGCAGGCCAAAAGATTGTGGCTGAGACAAAGAAGTTACTAGAAAAAGATGGATTCAATAGTGCTTTGGAAGGGATAAATGAAGCTTTGAATAGGGTGAAAGATGGAGTGCTAAATGGAATAGAAACTTTGATTTCAACTATTTTAAATGTACCAGAAGACAAAATATATTCTACTGCTGGATCCCCACGGTTTGAGGTTTATAGTATTGATTTTGGATGGGGGAGTCCTAAAAAGGTGGATGTCACTTCCATGGACAAAACAGGGGCATTTTCCCTTTCGGAGAGTAGGAAGAATGATGGTGGAATTGAGATTGGGTTGGCGTTGAAAAAACCAGAAATGGAAGCTTTTTCTGCCCTTTTTGTTCAAGGACTTGAATCCTTTTAA 1350 0.4267 MTQTAPFKVVQVCSVAPLQGTPTSLPLTFFDLLWLRFPPVERLFFYEYQNSTSSFFDSVLPNLKHSLSLTLQHFLPLAGNFTWPHDSSKPFIQYVPGDAVSFTVAESNASFTHLCSDLCEAAQRYPLIPHLTTSHERASVIALQVTLFPNSGFCIGITTHHAAFDGKSSTSFMKSWAYTCSKLGESPSLSSLPENLTPFFDRSVIRDPAGIDELYSEAWLKHGGPNNRSLKVWDSLNAIQTDAMKGLFELTPSHIQRLKQYAHSVLKKKDHISTFSVTCAYVLACLVKAQQPKCNRLVFVFSVDCRSRLDPPIQPAYFGNCVAGQKIVAETKKLLEKDGFNSALEGINEALNRVKDGVLNGIETLISTILNVPEDKIYSTAGSPRFEVYSIDFGWGSPKKVDVTSMDKTGAFSLSESRKNDGGIEIGLALKKPEMEAFSALFVQGLESF. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02559 449 Pfam Transferase family 23 439 - -
Seca10g02559 449 SUPERFAMILY CoA-dependent acyltransferases 245 448 - -
Seca10g02559 449 PANTHER - 8 449 - -
Seca10g02559 449 Gene3D - 7 229 IPR023213 -
Seca10g02559 449 Gene3D - 240 449 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02559 Seca-Chr10 31945695 31947044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02559 15 444 Monolignol Biosynthesis Gene Families AT5G48930 25.442 9.47e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02559 - - gmx:100800849 583.563