Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02542 ATGGCCTTGTTCACTGCAATTCTTGGTGTTGTCTTGGTGCTCTGTTTTTGCTCTGCTCTTTTGAGGTGGAATGAACTAAGGTACAGGAAGAAAGGCTTGCCTCCTGGTACAATGGGATGGCCAGTTTTTGGGGAGACAACTGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAAAACCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTGGGATGTCCTACCATTGTATCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAAGCAAAAGGACTAGTTCCTGGATACCCACAATCCATGTTAGATATCTTAGGCAAATCTAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATAAGAGGAGCACTTCTTGCCATCATTAGCCCCACCTTGATCAGAGATCACCTTTTACCCAAAATTGATGAGTTCATGAGAGGCCACCTAAGCAATTGGGAAAACAAAGTCATCAACATTCAAGAGAAAACCAAAACGATGGCATTCCTTTCATCTCTGAAGCAGATTGCTGGCATAGAATACAGCTCAATATCTGACTCAATCACAACAGAGTTCTTTAAGCTAGTTGTAGGAACCCTTTCTCTCCCTATTGACCTTCCTGGGACAAATTACCGCCATGGATTCAAGGCAAGGAAGAATATAGTCGGCATTCTGACTCAGCTAATAGAAGAAAGGAGAGCATCCCATGAAACCCATCAAGACATGCTTGGTTGGTTGTTGGAAAGAGATGAAAATAGATACAAATTGAGTGATGAAGAAATCATTGATCTATTGATCACAATTATGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAGTACCTCCATGACAATCCCAAAGCTCTTGAAGAACTTAGAGTAAAATATATGTTGCAGAAAGAGCATTTGGCCATAAGAGAGAGGAAAAATCCAGATGATCCACTTGAGTACAATGATCTCAAGTCAATGAAATTTACTCGTGCGGTGATTTTTGAGGCATCTAGATTGGCCACAGTAGTTAATGGGGTTCTGAGGAAAACCACTCAAGACATGGAACTAAATGGCTATTTCATTCCCAAAGGGTGGAGAATTTATGTGTATACAAGAGAGATAAATTATGACCCTTTTCATTATTCTGATCCACTAACATTCAACCCATGGAGATGGCTGATATCCTTCAACTGCAATTTGCAGGATAAGAATCAGGAGTCACAAAGCTACTTCTTGTTTTTTGGAGGAGGCACCAGACTGTGTCCAGGAAAAGAGCTGGGAATAGTTGACATTTCAACTTTCTTGCACTACTTTGTAACTACATACAGGTGGGAAGAAGTAGGAGGAGAAAAACTAATGAAATTTCCTAGAGTTCAGGCACCAAATGGACTGCACATAAGAGTGGCATCTTACTAA 1434 0.4045 MALFTAILGVVLVLCFCSALLRWNELRYRKKGLPPGTMGWPVFGETTEFLKQGPNFMKNQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKSNIAAVHGSTHKYIRGALLAIISPTLIRDHLLPKIDEFMRGHLSNWENKVINIQEKTKTMAFLSSLKQIAGIEYSSISDSITTEFFKLVVGTLSLPIDLPGTNYRHGFKARKNIVGILTQLIEERRASHETHQDMLGWLLERDENRYKLSDEEIIDLLITIMYSGYETVSTTSMMAVKYLHDNPKALEELRVKYMLQKEHLAIRERKNPDDPLEYNDLKSMKFTRAVIFEASRLATVVNGVLRKTTQDMELNGYFIPKGWRIYVYTREINYDPFHYSDPLTFNPWRWLISFNCNLQDKNQESQSYFLFFGGGTRLCPGKELGIVDISTFLHYFVTTYRWEEVGGEKLMKFPRVQAPNGLHIRVASY. 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02542 477 Pfam Cytochrome P450 34 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 FunFam Cytochrome P450 85A1 24 476 - -
Seca10g02542 477 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 SUPERFAMILY Cytochrome P450 26 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 Gene3D Cytochrome P450 24 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Seca10g02542 477 PRINTS E-class P450 group IV signature 55 78 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 PRINTS E-class P450 group IV signature 365 379 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 PRINTS E-class P450 group IV signature 332 348 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 PRINTS E-class P450 group IV signature 381 399 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 PRINTS E-class P450 group IV signature 411 427 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02542 477 PANTHER CYTOCHROME P450 26 30 455 - -
Seca10g02542 477 CDD CYP90-like 60 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02542 Seca-Chr10 31716133 31719975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02542 81 477 Cytochrome P450 AT5G38970 66.583 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02542 K09590 - gmx:100805958 805.053