Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02533 ATGCTCAAAACGCTTGAAAGGTACCAAAAGTGCAGCTATGGTGCAGTTGAAGTCAGCAAACCTGCAAAAGAGCTTGAGAGCAGCTACCGTGAGTACTTGAAGCTGAAAGCAAGATTTGAATCTCTTCAAAGGACCCAGAGAAACCTTCTAGGTGAAGACTTGGGCCCATTGAATACCAAAGATCTTGAGCAGCTTGAGCGCCAACTGGATTCATCTCTTAAGCAAGTGAGGTCCACAAAGACCCAATTCATGCTGGACCAGTTAGCTGATCTTCAAAATAAGGAGCAGATGTTGGTAGAAGCAAACAGAGCTTTGACCATGAAGCTGGATGAAATCAATTCAAGAAACCAGTATAGGCAAACATGGGAAGCGGGTGATCAAAGTATGGCATATGGTGCACAGAATGCTCACTCTCAAGGCTTCTTCCAGCCTTTGGAGTGCAATCCCACATTGCAGATAGGCCCTGACTACAGGTACAGTCCTGTAGCCTCAGATCAGCTAACTGCCACAACTCAAGCTCAACAAGTGAATGGCTTTATTCCAGGATGGATGCTTTGA 558 0.4552 MLKTLERYQKCSYGAVEVSKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLNTKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEQMLVEANRALTMKLDEINSRNQYRQTWEAGDQSMAYGAQNAHSQGFFQPLECNPTLQIGPDYRYSPVASDQLTATTQAQQVNGFIPGWML. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02533 185 Pfam K-box region 23 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca10g02533 185 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca10g02533 185 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02533 Seca-Chr10 31539085 31544554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02533 1 185 MADS-box Gene Family AT5G15800 67.500 1.14e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02533 K09264 - gmx:100785322 345.895