Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02493 ATGCAGACCAGGGAGGTTACAGGACTCAATTACATGCTCCCTTCAAACCCACCTCCTTATCCAGCCAACTACAACATGATTCAGAACAACATTCCCACATTTCAATTCCAAAGATTTTGTAACCAATTATATGGTTTCCAGAACCCCCCTCCTCCTCAAGTTCCTGACTTTAGTCCTCAATCATCATGTATCAGCAGCAATTCAACTTCTGATGAAGCTGATGAGCAACAACTATGTCTCATCAATGAGAGGAAACACAGAAGAATGATATCAAACAGAGAATCAGCACGTAGATCACGCATGAGGAAGCAGAAGCACCTTGATGAGCTTTGGTCACAAGTTGTTTGGCTGAGGAATGAGAATCACCAGCTAATAGACAAATTGAACCATGTGTCAGAGAGCCATGATCAAGTCCTTCAAGAGAATGCTCAGCTGAAAGAGGAAGCTTCAGAGCTTCGCCAAATGCTAAGAGATATGCAGATACATAGTCCCTGCCCTTCCTTTAGCCCTTTGGAAGATGTTCCTTGCAGTTCAGCATATCTCAGATCTGATTCTTCAAACCAATCCATCTCAAGTTCCATGGACCTGCTTGGCTGA 597 0.4338 MQTREVTGLNYMLPSNPPPYPANYNMIQNNIPTFQFQRFCNQLYGFQNPPPPQVPDFSPQSSCISSNSTSDEADEQQLCLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSESHDQVLQENAQLKEEASELRQMLRDMQIHSPCPSFSPLEDVPCSSAYLRSDSSNQSISSSMDLLG. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02493 198 Coils Coil 128 162 - -
Seca10g02493 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Seca10g02493 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 168 IPR044521 -
Seca10g02493 198 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Seca10g02493 198 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Seca10g02493 198 Gene3D - 82 138 - -
Seca10g02493 198 FunFam BZIP transcription factor 82 133 - -
Seca10g02493 198 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
Seca10g02493 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Seca10g02493 198 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02493 Seca-Chr10 30830643 30831239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02493 19 168 bZIP Transcription Factor Family AT3G30530 64.052 6.41e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca10g02493 bZIP_1 3.1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02493 - - aprc:113867865 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02493 10 30830643 30831239 Seca10g02493 10 30830643 30831239 ECH
Seca10g02493 10 30830643 30831239 Seca10g02493 10 30830643 30831239 PCT