Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02478 ATGGATATGGAGAACTTGACAAAAAGTTGTTCTATCATTCAAGTTGAGACATTCAACTCAAAGAAGAAAAGAAGTGGGGTTTTGTTGAGAAGGAAAGCAGACAACACAGTTAATGCACACTGGAAAGAAGCAGCAGAGATGGTAATAAAAATGTGTTCAAGATACTATGATGCTTCTGGCATTGTGAAAGACCTTGACAATGATAGCAGGATGAAATTTGAAGGCATTGTTGCTAAAATGCTTCTTCCATTCCATATTCCAATGGTTTTAGGTGCACGGAATGGGTAA 288 0.375 MDMENLTKSCSIIQVETFNSKKKRSGVLLRRKADNTVNAHWKEAAEMVIKMCSRYYDASGIVKDLDNDSRMKFEGIVAKMLLPFHIPMVLGARNG. 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02478 95 Pfam Cation transport ATPase (P-type) 2 54 - -
Seca10g02478 95 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 80 IPR023299 GO:0000166
Seca10g02478 95 PANTHER CATION TRANSPORTING ATPASE 1 80 - -
Seca10g02478 95 Gene3D - 1 81 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02478 Seca-Chr10 30181228 30181515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02478 1 80 Primary Pumps ATPases AT3G63380 51.250 1.55e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02478 K01537 - gmx:100793918 139.043