Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02469 ATGCTCTTGAGTGAGGAAGACAAGCGTGTTAACTTTTGGTTGAGTAGCATTAATGTTTCACCGTGTAATTTTGTGGTACTGTGTGATGCCTTCCCCATATCTGCATTCAATGTTGTCTCACAAAAGGAGGTTGGTTTATCCTTGGTTAAAGACATGGTGTCAATGGCAAGTATTTCTATCGATGATGTAAAAGTTATTTGTTTCAATAATGAGGAGGAGCATGTAGCTGATAATGTTGTGGAGAAAGAAAATGTTGTTGGGTATGTGGAAAATGTTGTTTCTAATATGGAGCAAGATGCTGAAACTAGTTACCACTTGTGTAAGAAAAATGTAGGAGCTATTAATTTTGAAGGTGGTGGTTCTAGTAATGAAGTTGAGACATCAAGAGATATGCAAGAGAATGAGATGCATGGGTTTAGCTTACTAGAAGAGTTTAAGGTGGATTGTGGGTCTGAATTGAAGAGCATTGAATTTTGTACATTAACACCTATCGATGTGATGAAGTACCATTTTGCTAATCTTGATCTGGCTGATGAATTCTATCATGAGTATGCAAAAAATAAGGGCTTTGCTATCCGGAAAAGCAAGGTGGGAAGGAACAAGGAACGAAATTTGGTAAGAAAGACTTTTTTGTGCTTTAAGGAGGGCTTTAGACAAAAGAAGCACTTAAACAGGGTAGATCGGAAGCATGAGGCAAAACCTTTGACTCGTTGTGGGTGTAACGCAAGAATTCGGGTCCGTCTCGATCCTGGAAGTAACCGATGGTGTGTGAAATTCTTTTCTGATGAACACAACCATGAGCTTTTGTCAGACAAATATGTCGGAATGCTAGCTGGACATAGAAAAATGAAAGAATCTGATATATTGCAAATGAAGAACTTAAGAGATGTTGGGATCAGCACGCCACTCATTTTTGGCTCTTTTGTGAAACAATCTGGAGGATTTAAGAATGTTGGCTTCAATAAAAGAGACATGTATAATCAAATTAAGAAAGAAAGGCGCACTCAAGCAATCAATGCAAAAGCAGCCATAACATACATCAATCGACTGCGTGTTAATGATCCTACATTCTATTTTATCCACATAGCTGATGGTGAAGGCAGGTTGGAAAATCCGTTTTGGGCAGATTCCATTAGCCAAGTTGATTATCAGATTTTTGGAGACGTGCTAGCAAGCTTTTGA 1182 0.3841 MLLSEEDKRVNFWLSSINVSPCNFVVLCDAFPISAFNVVSQKEVGLSLVKDMVSMASISIDDVKVICFNNEEEHVADNVVEKENVVGYVENVVSNMEQDAETSYHLCKKNVGAINFEGGGSSNEVETSRDMQENEMHGFSLLEEFKVDCGSELKSIEFCTLTPIDVMKYHFANLDLADEFYHEYAKNKGFAIRKSKVGRNKERNLVRKTFLCFKEGFRQKKHLNRVDRKHEAKPLTRCGCNARIRVRLDPGSNRWCVKFFSDEHNHELLSDKYVGMLAGHRKMKESDILQMKNLRDVGISTPLIFGSFVKQSGGFKNVGFNKRDMYNQIKKERRTQAINAKAAITYINRLRVNDPTFYFIHIADGEGRLENPFWADSISQVDYQIFGDVLASF. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02469 393 PANTHER OS01G0519700 PROTEIN 169 390 - -
Seca10g02469 393 Pfam FAR1 DNA-binding domain 179 269 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02469 Seca-Chr10 30026929 30028988 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g02469 FAR1 5.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02469 - - mtr:120580664 248.44