Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02460 ATGCAGTTTCTTATCGAGTTGGCAACAGGATTTGTGACAAAACTTGGAGAGTCATTAGCAGCACCAATTGCAAATCAGTTTGGTTATATAGTTTACTACAACAAAAATATAAAAAATCTTAAGAATGAACTCAAAACATTGGAAAGTAGGAAAAATGGGGTGCAAGGGATGGTGGTTGCTGATAAAAGGAATGGACATCAAATTGTATCCAATGTAGAAGATTGGCTCTGCAAGGTGGACAAAATAGAAAATGAACTACAAGGATTCTGTGATGATCAAGTGAACAACAAATGCCTTGGTGGGTGGTGTCCAAATTTGGTGTCACGTTATTCATTGAGCAAGAGAGCAAACAAATTGACCACAAATGTTATTAGCTTAAAGGAAGAGAAATTTGATATCATATCCTACCCTGCTCCTCCACCAAGACTTGGATCCACATTCTCAAATGTTTTCAAAAGCTTCCCAACTAGAAAATCAATTATGATAGAGGTCTTGGACAAACTAAAAGATGAAGATTTCAAAAGGGTAGGAATATGTGGGATGGCTGGTGTGGGGAAAACCATGTTTGTGAAAGAAGTAATCAAAATTGTAGAAGCAGATAAGTTATTTGATGAAATCGTAATGGCAGTGGTATCCCAAAATCCAGACTACAGGAAGATTCAAGGCCAAATAGCTGATGCTTTAGGCTTGAAATTTGATAAGGAGACTGTTCAAGGAAGAGCATGTCAACTACTTGATAGGTTGAAAAATATCAATAATGTCCTAATAGTACTTGATGATGTTTGGACAGAACTTGATTTTGAGTCTATTGGGCTTCCTTCCAATGAGCATCACAATAGTTGTAAAATTTTGTTCACATCAAGAATTGGAGATGTGTGCTATAAGATGAGAAGTCAAAAGAATTTCATAATCTCTGTCTTGTCTCCATATGAAGCATGGGATCTTTTTCATGATATAGCAGGTGGTAATCTTGTAAACAAGCCTGATATCCATCACATAGCAAAAGAGGTTGCAAATGAATGTGGGGGGTTGCCACTTGCTATTGTGACAATAGCAAAAGCATTAGCAGATAAAGAGAAGCATGCATGGGAAGATGCATTGGATCAACTAAGAAAGGCTTCAATTACATCCCTTCCAGAAATGCAAGCTTGTGTATATTCAAGTATCAACTTGAGTTACAATTTTTTGAGCAATGAAGAAGATAAGTATTTCCTTTTCCTTTGTTGCTTATTTCCGGAAGACTATGACATTCCTGTGGAAGTTCTACTCAGACATGGAGTGGGTTTGGGATTGTTTAAAGGCATTGATGCATTGTGGAAAGTTAGAAACAGAGTGCATACCATTGTTGATAGATTGAAAAAATGCTTCATGTTGCTAGATAGTAATGAGGAAGAGTGTGTAAAAATGCATGATGTTGTACGTGATGTTATCATATCAATTGCATCTAAAGAAGAACATGGTTTTATGGTACAATGTGATGCTAATCAAATGGAGTGGCCTAAAAATGAAACAAGGGGCCATAACAATGCAATCTCACTTATGTTTGAAGAGACAAAGAAGCATCCTGAAGTCCTAAAGTGTCCAGAGCTTAAGCTTTTACAAGTAGCATCAAAGAAAAGGGAATCAGTTCCGGAAAATTTCCCCCAAGGATTGAATAAGCTCATGGTCTTTGGTCTACAAAACATGTACATTCACTCAATGCCATCTATGTTCCAAGCTTTGGACAACATCCACACTCTAAGATTAGAAGATTGCCATGTTGGAGACATATCCATAATTGGTAAGAAACTCAGAAAACTAGAGATTCTTAGCTTTGCTAACTCAAATATCAAACAATTGCCAATAGAAATTGGACAACTAAGCTTGCTAAGATTATTGGATTTAACTGAATGCAATTATCTCATTCATGTTTCTGCTAATGTCTTTGCAAGCTTGTCAATGCTAGAAGAACTCTATCTTAGAGTAAGGAATTTCCCTTCAAAGGAGACTAATCAGATTCTCTTTGAGTTACAAACTTTATCTCATCATCTAAAGGTTGTTGAGATTGCAATTATGGCAGATGAAGCTTTGCCAAAAGATTTGGTTTTCAGAAACCTAGTGAGGTTTTGGGTTTATTTGGGAGATTCATCCACTCTTTTTCATGGTCTTGTTCGCAGGGGATACCTACACCCAAATATTTTGAAACTGAATAATGCATATTACAACTATATCAAGAAGAGTGTGACAATTCAACAGTTGCTTCAGAAAGTTGAAATTCTAAACTTATTTGATATCAAGCACTTGAAAAATGTTGTTTCAAAAATGCCATCTTTAGATGAAGGGGGTTTTCCATTTTTGAAACATCTAAGTATTGAGTCCTGCAATGATTTACATTATGTTGTGGATGCATGTGATGATTGTGTCTTTCCACAACTTCAATCATTTTCTCTAAGTAATTTGGATAATTTAAAAGAGATATGCCATGTGCCTAATCCCATGAGTCAAAGAGTTGACTTTGCAAAGGACTTCACTTCATGTCAATGCTTTGGAAGCTTAACAGATCTTAAAATAGAATACTGTAGCAAATTGAAGACCATCTTCAGATTGTTTCCAAGGACAATTAATTTGGCAACACTTCAACGCTTGCATGTGGCTGAAAGCTATGGAATTGAATGCATTATCTCAATCAATATTGAACAAGCTGAGAAGTCAATGATTGAGTTTTCAAAATTAGTGGAACTGAAGCTACAAGAACTTCCAAATCTGATCGAGTTCACTAAAATCAATGTTATGCATGAGCACCATTCCTCAACAGTCCAAGAATCAACTCTTCAATCAATTGAGAAGGCAGTGATTTCAGAGGGTCAGTTGTTATCTGTGTCCAGTTTAATATCAAGTGCTGATGAACTAACTGGTTCCCTTTTAAAATCTAATTGGATGCAATTGTTCCCAAAGTTAGAAAAAATCTTATTAGATGCATGCTCTTCATTAGATATGGTGTTTGACATGCAAGAATTACAGTTGAATAGCCAATCAACGGCTCTGTTATTTGCTCAGCTAAAAGAAATAGAGATATCTTGGCTTTGTAAGCTAAGACACATTTGGGGTAATGTTCCAAGTTACATTCAAGGCTTTCAGAATTTGAAATCCATCAAAGTTAAGAAGTGTGATTCTTTAAGATATGTACTCACACTGAGCATGGCAAGAGCACTTACTCATCTTCAAAAAATGGTGATACACAGTTGCCAGTCCTTGGAGAAAATTGTTGAGAAGGAAGCAAACCTAGATGGTGATGCTAGTGGTGAAAAGAATGTGGAAACCCTTGTGTTTGGTCAATTAGAAACTTTAACACTAAAGGATCTCCCATGTCTTGTGAGTGTTTGTCCAGATTCTTATGAGATAGTATGGCCATCTTTGAGATCATTGTGCATTGATGGATGCCCCCAGCTTAAGATTCAAACTGATTCAAAGCAAGAGAATTTCATCAATGCCTCATTAAGTGATGTTGCAAATAGAACTTCTAAATTAGAAGACTCCCCAATGTTTCATCAGTGTTGCTTTGGATGCACCCCGCATGTATTTTTCAACTTGAAGGGCAAGGCTTCATCAACAGAGAAAGGTTTCCCTTCTGTCAGTAATATAAATAACAAATCAGAAATAGTATTTCCCATGCAAAATTTGGAACAACTTCAAGTAAAAGGATGGGATTCACTGGAGGTCTTATTCCTGCTTAAACAAAACCAACATTCTGATATTACCACTATCAATTGTCTAGTAAAAAAGATGATGATACAGAGAGTACTAACAAGTCTTGTAGGAGTCACTGCATTCAACAACCTCACACTATTAAGTTTAGATGCTTGTCACAGGTTGAGACATCTATTCTCATATTCCATAGCAAAGCTCCTTGTGAAATTGCAAGAAATAAAAGTATCAAACTGTAAGGTGGTAGAGCAATTAGTCCTGAAAGAAGGAGAAGAAAGTTTAACTCTGTTTCTTGCTCAATCAAATTTTGTGAAGGTACTAGAGAATTCATCTTCTAGTGATCATGCTACCATCTCCCAAGAGGCATGTGCTTTAGAGTGGCCATCCCTAAAGAGAATCAGCATTGTTAACTGCAACAAGCTAGAAGTTGTTATTAGTAAAGTGGAGGAGAAAATAGATATCACTTCATTTGCTCAACTACAATCTCTTACATTAAGCCATCTACCAAATCTTGCAAGCTTTTGCCTCCGACCTTGTGCATCAAAACAACCATCCTTGGAGAACTGCCATGGGAGTAGCTATCAAAAACAAGATGAGGGAACAAGTAATGAAGATAGAAGAAACATGGAACTTGATCCACTTATAGATGGCTTCGTTTTTCCAAATCTAACATACCTAACAATAACAGGCTGCAACAAAATTCGTAGTTTGTTGTCTCCTTCATCTTCAAAAAGCCTTGTGCGTTTGGTAGAGCTAGATATATGTGGTTGTGGGGACATAGAGGAAATAGTATCTACATCTACAGAAGGAACAAATGGAAGTGTTAATAAGATTGTTTTTCGCTGCTTGCAGCGTCTAAAACTTGAAAATCTACCCAAGATCATGGCCTTCTGCAAGGGTTCCTATGACTTTGATTTTCCATCATTGCATCAAGTTTTCCTAAAAAATTGCCACCTGATGGAGATATTCTCATACGGGTCATCATACACTCCAAAGTTGGATGAAGTAACCATGGAAATAGGAAATATTACCAAGAACATATGGATGGGAGATCTGAATGCTACTGCATCACTATGCAAAGGAATTTTAGCATTTCAAACATCAGAAACACTAAGATGGATCAAGCAGGATCAATGCCTACTGAGATACTTCACCAAAGAAAAAGAGATGACTGTTGAAGGTTTTCAAAGACTGCTAAATCTTGTTCCCTGCAATGTTATGCACATATTTCAAAATATGAAGGAACTCACAGTAAAAAATTGTGGTTCACTGGTTGAGGTGTTTGAATCAGAGGGAGTAGATGTAAAGCAAAAGCAAGCCATGATACACTATGAGCTAGAAGCAATGAACTTCCATTCTCTACCAAAATTGATCCACATATGGAAAAACCATGGTGAAGTTTTAGGATTCCAGAAGCTAAGAATACTAAAAGTTGAGCATTGTGGCAACTTGTGTAGTTTGCTCTCTCCATCCATAGCAAGAAGCCTAGTGCAACTCTGGCACCTAAGAATATATAGTTGCCACATGATGGAGGAGATAACTACAAAGGAAGATAAGGACACTGAAAGATTTAAAAACAAAGATACCATTTTATTTCCAATGTTAAACAAGCTGGAGCTTCGTTATCTTCCCAACCTCAAATGTTTCTGTTCAGGGAGTTTTAATATTGAACTCCCTTCTTGTGATGAAATGATAATTGAAAAGTGCCCACAGTTGACAACCTTTTGCTATGGAGCTGTAACCACACCAAAGCTTCCTCATATATATAAAGGATCGTATGAATATATGGACCTAGTGGGAGACCTTAATATGACCATCTATCACACTAATGAGAATTTGAAGGTACATGCATTCTCCATATGTAAGCACAATAAAGATATGATGACTCAAAAAGAAAATATAGATATAATTTATGTTTAG 5604 0.3651 MQFLIELATGFVTKLGESLAAPIANQFGYIVYYNKNIKNLKNELKTLESRKNGVQGMVVADKRNGHQIVSNVEDWLCKVDKIENELQGFCDDQVNNKCLGGWCPNLVSRYSLSKRANKLTTNVISLKEEKFDIISYPAPPPRLGSTFSNVFKSFPTRKSIMIEVLDKLKDEDFKRVGICGMAGVGKTMFVKEVIKIVEADKLFDEIVMAVVSQNPDYRKIQGQIADALGLKFDKETVQGRACQLLDRLKNINNVLIVLDDVWTELDFESIGLPSNEHHNSCKILFTSRIGDVCYKMRSQKNFIISVLSPYEAWDLFHDIAGGNLVNKPDIHHIAKEVANECGGLPLAIVTIAKALADKEKHAWEDALDQLRKASITSLPEMQACVYSSINLSYNFLSNEEDKYFLFLCCLFPEDYDIPVEVLLRHGVGLGLFKGIDALWKVRNRVHTIVDRLKKCFMLLDSNEEECVKMHDVVRDVIISIASKEEHGFMVQCDANQMEWPKNETRGHNNAISLMFEETKKHPEVLKCPELKLLQVASKKRESVPENFPQGLNKLMVFGLQNMYIHSMPSMFQALDNIHTLRLEDCHVGDISIIGKKLRKLEILSFANSNIKQLPIEIGQLSLLRLLDLTECNYLIHVSANVFASLSMLEELYLRVRNFPSKETNQILFELQTLSHHLKVVEIAIMADEALPKDLVFRNLVRFWVYLGDSSTLFHGLVRRGYLHPNILKLNNAYYNYIKKSVTIQQLLQKVEILNLFDIKHLKNVVSKMPSLDEGGFPFLKHLSIESCNDLHYVVDACDDCVFPQLQSFSLSNLDNLKEICHVPNPMSQRVDFAKDFTSCQCFGSLTDLKIEYCSKLKTIFRLFPRTINLATLQRLHVAESYGIECIISINIEQAEKSMIEFSKLVELKLQELPNLIEFTKINVMHEHHSSTVQESTLQSIEKAVISEGQLLSVSSLISSADELTGSLLKSNWMQLFPKLEKILLDACSSLDMVFDMQELQLNSQSTALLFAQLKEIEISWLCKLRHIWGNVPSYIQGFQNLKSIKVKKCDSLRYVLTLSMARALTHLQKMVIHSCQSLEKIVEKEANLDGDASGEKNVETLVFGQLETLTLKDLPCLVSVCPDSYEIVWPSLRSLCIDGCPQLKIQTDSKQENFINASLSDVANRTSKLEDSPMFHQCCFGCTPHVFFNLKGKASSTEKGFPSVSNINNKSEIVFPMQNLEQLQVKGWDSLEVLFLLKQNQHSDITTINCLVKKMMIQRVLTSLVGVTAFNNLTLLSLDACHRLRHLFSYSIAKLLVKLQEIKVSNCKVVEQLVLKEGEESLTLFLAQSNFVKVLENSSSSDHATISQEACALEWPSLKRISIVNCNKLEVVISKVEEKIDITSFAQLQSLTLSHLPNLASFCLRPCASKQPSLENCHGSSYQKQDEGTSNEDRRNMELDPLIDGFVFPNLTYLTITGCNKIRSLLSPSSSKSLVRLVELDICGCGDIEEIVSTSTEGTNGSVNKIVFRCLQRLKLENLPKIMAFCKGSYDFDFPSLHQVFLKNCHLMEIFSYGSSYTPKLDEVTMEIGNITKNIWMGDLNATASLCKGILAFQTSETLRWIKQDQCLLRYFTKEKEMTVEGFQRLLNLVPCNVMHIFQNMKELTVKNCGSLVEVFESEGVDVKQKQAMIHYELEAMNFHSLPKLIHIWKNHGEVLGFQKLRILKVEHCGNLCSLLSPSIARSLVQLWHLRIYSCHMMEEITTKEDKDTERFKNKDTILFPMLNKLELRYLPNLKCFCSGSFNIELPSCDEMIIEKCPQLTTFCYGAVTTPKLPHIYKGSYEYMDLVGDLNMTIYHTNENLKVHAFSICKHNKDMMTQKENIDIIYV. 1868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02460 1867 SMART AAA_5 172 308 IPR003593 GO:0016887
Seca10g02460 1867 SUPERFAMILY RNI-like 1448 1804 - -
Seca10g02460 1867 Gene3D Ribonuclease Inhibitor 1412 1567 IPR032675 -
Seca10g02460 1867 Gene3D Ribonuclease Inhibitor 937 1159 IPR032675 -
Seca10g02460 1867 Gene3D Ribonuclease Inhibitor 1624 1813 IPR032675 -
Seca10g02460 1867 Gene3D - 145 305 IPR027417 -
Seca10g02460 1867 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1325 1562 - -
Seca10g02460 1867 PRINTS Disease resistance protein signature 618 634 - -
Seca10g02460 1867 PRINTS Disease resistance protein signature 341 355 - -
Seca10g02460 1867 PRINTS Disease resistance protein signature 175 190 - -
Seca10g02460 1867 PRINTS Disease resistance protein signature 248 262 - -
Seca10g02460 1867 SUPERFAMILY L domain-like 524 660 - -
Seca10g02460 1867 MobiDBLite consensus disorder prediction 1412 1434 - -
Seca10g02460 1867 Coils Coil 30 57 - -
Seca10g02460 1867 Coils Coil 353 373 - -
Seca10g02460 1867 Gene3D - 306 388 IPR042197 -
Seca10g02460 1867 Gene3D - 389 479 IPR036388 -
Seca10g02460 1867 Gene3D Ribonuclease Inhibitor 506 920 IPR032675 -
Seca10g02460 1867 Pfam NB-ARC domain 162 394 IPR002182 GO:0043531
Seca10g02460 1867 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 407 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02460 Seca-Chr10 29872266 29889220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02460 172 484 WRKY Transcription Factor Family AT5G45050 26.708 3.77e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02460 - - vra:106757704 2482.6