Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02439 ATGGCTTCCATAATTACCATGATAGCCTCTTCCTTCCTCGTCCTCTCTCATTTCTTCATCTTCTTCCCAAACGCAGCAACTGCCTCCAGTGTCTCTGCTGTGTTCGCCTTTGGTGACTCCACAATAGACTCTGGCAACAATAACCGTCTCAACACTCTGTTCCGTGGGGACCACTTTCCCTACGGTCGTGACTTTCCAAACCACACCCCAACTGGAAGATTCTCAAATGGGAAGATCGCAACTGATTTCCTTACCCACATGCTAGGCATCAAGGATCTCTTGCCTGCTTATCTTGACCCTCATTTGACCGATAATGATTTGCTCACTGGAGTTAGTTTTGGCTCTGGTGGCTCTGGATTGGATAGTAGGACAGTGGCCTCAGCAAGGGTTATCGACTTGGCTACACAATTTAGGCTCTTTGAAGAGGCTATAATGAGGATTAAAAAAAATGTTGGAGATGACAAGGCTAATGATATCATTCAAAATGCCTTGTTTGTCATTAGTACTGGGACTAATGATATGCTTTACAATGCATTTTTGTTTCCAGCAAGGATTATTCGTTTTGGCTCTATGTCAGCTTACCAAGATTTTCTCCTCCGGAATCTCCAAACTTTCATTCAGAGGCTTTATGAAGCAGGAGCTCGCAGGATTATGGTGGCTGGTCTTCCCCCAATTGGGTGTTTACCAATGCAAGTGACAGTGAGCAGCTTCTTCCTAACCCCACACTGGCTACAACGAGTTTGTAACGATGAACAGAACACGGATTCTCAATCATACAACTCCAACCTTCAATCTCGTGTTCAATCATGGCAAAACTCACTCAATGGTGCCAAGGTTGCCTATTTTGATATCTACACACCCATTATGGATATGGTTCAAAACCCATCCAAATACGGTAGGTTTGAAAAATCAGTACTTGAAGGATGCTGTGGGACAGGGCTGTTGGAGATGGGTCCAGTGTGCAATGCATTTGATATAACTTGCCCAGATACATCGAAGTATTTGTTTTGGGATGCTGTCCACCTTACTGAAGCAGGAAACTCGTATGTTGCCGAGAGTGGTCAACAAAATGTGCTTCCATACCTTACTAGTTAG 1095 0.442 MASIITMIASSFLVLSHFFIFFPNAATASSVSAVFAFGDSTIDSGNNNRLNTLFRGDHFPYGRDFPNHTPTGRFSNGKIATDFLTHMLGIKDLLPAYLDPHLTDNDLLTGVSFGSGGSGLDSRTVASARVIDLATQFRLFEEAIMRIKKNVGDDKANDIIQNALFVISTGTNDMLYNAFLFPARIIRFGSMSAYQDFLLRNLQTFIQRLYEAGARRIMVAGLPPIGCLPMQVTVSSFFLTPHWLQRVCNDEQNTDSQSYNSNLQSRVQSWQNSLNGAKVAYFDIYTPIMDMVQNPSKYGRFEKSVLEGCCGTGLLEMGPVCNAFDITCPDTSKYLFWDAVHLTEAGNSYVAESGQQNVLPYLTS. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02439 364 Pfam GDSL-like Lipase/Acylhydrolase 34 352 IPR001087 GO:0016788
Seca10g02439 364 SUPERFAMILY SGNH hydrolase 34 355 - -
Seca10g02439 364 CDD SGNH_plant_lipase_like 33 352 IPR035669 -
Seca10g02439 364 Gene3D SGNH hydrolase 21 358 IPR036514 -
Seca10g02439 364 PANTHER GDSL ESTERASE/LIPASE EXL3 19 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02439 Seca-Chr10 29575483 29577176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02439 1 358 Pollen Coat Proteome AT1G75910 34.903 3.08e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02439 - - aprc:113874497 525.013