Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02432 ATGGCTGCCCTCTCAGATCGCCGCCGCGTGTTCCCGGCGACCGACGCTGATGACCACCCAATGGCAGAGTCCGTCTCTAACAACAACAACAACCTCCGTGAGAAGACCCGGCGAGTCGCCGGAAAAAACGGCCACCGGCCTCGCCCTGTTCGGCAACGCTCTTTAACGAGAAATATTGAACACGTCGCCGCAGAAACTTACTTGATCACTCGTCTCGCCTTCAAGCTTCTTCAGTATCTCGGGATTGGTTACCGTTGGATTACGAAATTTCTTGCCCTTGGATGTTATGCCATGCTACTTATGCCCGGTTTTCTACAAGTTGCATTTTACTATTTCTTCTCAAGCAAGGTAAAACGAAGCATTGTGTATGGAGATCAGCCAAGAAACAGGTTGGATCTGTATCTACCTGTTGATATTAGCGAACCTAAGCCAGTTTTGATATTTGTAACTGGTGGAGCATGGATTATTGGGTATAAAGCATGGGGATCCCTTTTAGGACTTCAGTTGGCAGAAAGAGACATTATAGTGGCATGCATTGATTACAGGTACCTGGTCTCAGTTCAAGCAGTGCAAGATTGA 579 0.4767 MAALSDRRRVFPATDADDHPMAESVSNNNNNLREKTRRVAGKNGHRPRPVRQRSLTRNIEHVAAETYLITRLAFKLLQYLGIGYRWITKFLALGCYAMLLMPGFLQVAFYYFFSSKVKRSIVYGDQPRNRLDLYLPVDISEPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERDIIVACIDYRYLVSVQAVQD. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02432 192 Gene3D alpha/beta hydrolase 112 188 IPR029058 -
Seca10g02432 192 Pfam BD-FAE 131 185 - -
Seca10g02432 192 SUPERFAMILY alpha/beta-Hydrolases 96 183 IPR029058 -
Seca10g02432 192 MobiDBLite consensus disorder prediction 14 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02432 Seca-Chr10 29464595 29466979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02432 2 182 Carbohydrate Esterase AT5G15860 64.674 4.28e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02432 K15889 - gmx:100788814 276.559