Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02429 ATGCATGCCAAGGGTTCTTCATCATTTGTCCCAAACCTTCCTCAGCAGAGAGGTTTTGATTTAAGTCAACAATATGTAAGAAATCAAGCAGGGTTCTGCACAGACTGGCGCAAGCCTCCTGAGATGCGCTACAAACGCTATTTCATTCGAAATAAAATTTCTGCTATTTTAAGTTCCAGCATTCATTGTGAGCAAGCAAAACAGTCATCTGATATTGCAACTATTCTGGAACACCGGCTATTTATTCATGCTGCTTCAAAGGAGGATTATATGAACCAGGAGACTTTGGTACAGCGAGTGCAAACTCAACTCAATAAAATGTATAGGACAAAAGGCATCCAACAACAAGTTGACAGCCCTATTACTTACACATATAAGACAGTTCCTTCTTCAGGGTTTTTGCATGCTTGGTCTAATGGAAGTCTCCCAGAACCTGCTTTTCAGAAAGTGGCTGCTCCTGTCATTAATGCCATTGATTATTGTGCAGTGAACACAAAAAATAAATACGACCTTCCAAAAGGAGGACTATTTAACACATCGATTGTTCATGAGCCAGTTCTTCCACCTCACTGTTCATCAATCACTGCATGTACTGATATGGATATGGATGTGCTTTCTAACTTCTCTGTTTCTGGTGGTGGATGCAATCCGGAAGCTAGCTCCAAATCTATTATTTCCTATTTTCCTCGGCAACATGCTAATGATTTGGAGATGGATCTGAAAAAATACAGTTGTTTGGGGACCATCCAGAAAAATGAGTCCATGGCTTTTCATTCTACAATGGGACCCCTCCAATCTGAATCTTTAAATTTGATGATCTCTCAACATGTCTCAAGGGAAAATTTGGAAGGTTCCAATCTTCTTCCTGCCTTGATGCAGCCATATGACCTTTGTGATAAAGCTTCTACTTCTACTGTCCAGTATATGCTACCACCTGACAAAAGACTAGAAATGGAATCTGCTTTTGGTGTCTCTTTGATGAATAATGCGAGTTCTGATCAATGGACTCACAAGATGGCTCTACCATATTCTTCTGAAGCACCTTTTGGTAATTCTGAGGCCATGCTTCCACCTGCCAAAAGACTAAAAATGGAGTCTGCTTTTGGTGTCTCTTTGATGAATAATGCAAGTTCTGAGCAATGGACTCACAAGATGGCTCAACCTTATTCTTCTGAAGCACCTCCTGGTAATTCTGAAGCCATGCTACCACCTGACAAAATACTAGAAATGGAGTCTGCTTTTGGTGTCTCTTTTATGAATAATGCAAGTTCTGATCAATGGACTCACAAGATGGCTCAACCTTATTCTTCTGAAGCACCTTCTGGTAATTCTGAAGCCATGCTACCACCTGACAAAATACTAGAAATGGAGTCTGCTTTTGGTGTCTCTTTTATGAATAATGCAAGTTCTGGTCAATGGACTCACAAGATGGCTCAACCTTATTCTTCTGAAGCACTTTCAGAATTACAGCAACAGTCAGAATCTCCCCCTATCCATTCTGAAGTTACAGAGTGCACTGCAGAACAATTTACAAATCCGATGCTTGATTCCATTAGCATTGATGAGATAAAGAACAGTGGAATTGATGATACATTTGGACAGTCTTTCAAGAGAGAAACAATTCCCTCTAAAGGCTTAGAAGTTGATCATATATCAGAGGAGCCAGACCCCAAAAGCCATAATATGATAAACAGCAGCAACTTAGAGGAAACTGTCATTAAATTGAATTCCAGTATGCATACTCTCTGCAAAGATACTATTGCTGCAGATATAGAGGACATACAAGGCAAAACTGGATTCAACCAGGCTGAGATAAATGGTGAAAAGAAAGTCATTGAGCCAAAAGCTGATCAAGAGAAGGAAACAAAGACCTCAAATACAGCAATTAGTGAGATAAATGGACTCACTAATTGCTTGATTAATAATTCAAGTTCTGATCAATGGACTCACAAGATGGCTCAACCTTATGCTTCTGAAGCACTTTCAGAATTGCAGCAACATTCAGAATCTCCCCTCTCTTCTATTGATTCTGAAGTTACAGAGTGCAATGTGGAACAATTTACAAATTCAATGTTTGATTCCATGAGCATTAGTGAGATAAAGAACAGTGCTATTGATGATACATTTGGACAGAATTTCAAGAATGAAACAGTTCCCTCTGAAGGCTTAGAAGCTGGTCATATATCAGAGGAGCCAGATCCCAAAAGCCATGATGTTGTAGACAGAAGCAACTTAGAGGAAACTGTCATTGGATCGAATTCCAATAAGCATACTCTCTGCGAAGATCCTATTGCTGCAGACATAGAGGACATACAAATCAAAACTGGATCCAACCATGCTGGGCTAAATGCTAAAAAGGAAGTCAGTGAGCCAAAAGTTGATCAAGAGAAGGAAACAAAGTCCTCAAATACAACAGTTAATATTGTTTCCTTAACTGAGTCCTTCACAAGTACTCAAATCATGGAACACATTAAGGGTCTGAGAAAGAAATTTGTTCAGGGCATAAGTGAGGAAGAAACAGGAATTGCTGCTAGCACATGCCAATTATGTGCAATGGAAAAGCTTTTTTTTTCACCAGTGCCAATTTATTGCTTATGTTGTGGCAGCCGGATCAAGAGAAATGGAAACTATTACTGTAAGAAAGCAGAAGAATTTGATACACAACATTGCTTTTGCAACCTATGCTATAAAAATTCTCGAGGTGGGTCAATCACATTCAATGGACTATCTGTTTCCAAGACACTTCTTGATAGAAAGAGAAATGATGAAGTACTTGAAGAAGCGTGGGTTGAATGTAATAAATGCAAAAGATGGCAACATCAAATATGTGCACTCTACAACAAAAGAAGAGATTTAGACCGCAGTGCTGAGTATATATGTCCTATATGCCGCTTAAAGGAAATTGAAAATGGAATGCATGTACCCTATCCAAAGACTGCTATTTTTGGTGCTAAGGACTTGCCAAGAACCATGCTTAGTGACCACATAGAGAAAAGACTTTTTCAGCGTCTCATGCAAGAGAGAACAGACAGGGCAAAAGCTGAAGGGAATAAGAATTTTGATGAGGTTTTAGCAGCAGAAAATCTTACTGTTAGAGTAGTGTTATCTGTTGACAAACAATTGAAAGTGAACAAGCAGTTTCTGGACATCTTTTTGGAGGAAAATTACCCTGCTGAGTTCTCTTATAAATCAAAAGTTATTCTTCTGTTTCAGCAGATTGAAGGAGCAGATGTATGCCTTTTCGGAATGTATGTCCAGGAGTTTGGCTCAGAATGTGGCTATCCCAATCAGCGTTGTGTATATATTTCATATCTTGATTCCGTTAAGTATTTTAGGCCTGAAAGCAAGACTGTGAAAGGAGAAGCTCTTCGTACCTTTGTTTACCATGAGATATTGATTGGATACCTTGATTTTTGCAAGAAAAGAGGTTTCACAACTTGCTACATATGGGCCTGTCCTCCTTTAAAGGGGGAGGATTATGTACTATATTGCCATCCTGACACTCAAAAGACTCCTAAGAAGGATAAACTTCGGCACTGGTATCACTCAATGCTAAGAAAGGCTGCTGAGGAAAATATCGTTGTTGGTTTAACCAACATATATGATCATTTCTTTGTTCCTACTGAAAAATGTGACTCCAAGGTAACAGCTGCTCGTTTGCCATACTTTGATGGAGACTACTGGTCTGGTGCTGCTATGGATCTAGCCAGGAACATTGAACAGGAGACTGGAGGAGAGTATGAAAAGGTATTGAAGAAACTAGTAACAAAAAGAACTTTAAAGTCCATGGGACACGTAGATCCTTCAAAAGGCACTGCCAAAGACATTCTAGTGATGCAAAAGCTGGGCCAAAATATTTTGCCTGTCAAGGAAGACTTCATCATAATTCAGCTTCAGCATGCATGCGTGCACTGTCATAAAGTCATAGTGTCTGGGAAGCGGTGGTTTTGCACTGAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATACTGCTGACTCACACACTTCAGTTAGTGGCGAGAAGCATATACTTTGTCAGGTTTACATGGATGATATTCCTGTTGATACTAGAGAGAATGGCATCATCCTTGATAATGGATTATTTGAGAATAGGAATAACTTTTTGAGCTTCTGCCAAAAGAATTATTTTCAGTTTGACACGCTCCGCCGTGCCAAGTATTCCTCAATGATGATCCTCTACCATCTAAAGAGTCCTACTATGCTGACTATTGGAACAATATGTAGCATTTGCTGTAAACCCAATGCCTTCCAACAGAGCTGGAAATGTGAGATTTGCCCCGAGTTCACTGTATGCTCTGCATGTTATAAGGAGACAGGTGCTAAATCCCATGCACACAAGTTGAGTCAAACTAACTCAACAGCATTATGTCTCTCTGGGAATGAAGAGTCAAAGCAGAAATCAGTACTGATGCAGAAACTGCTAGAAGTTTTACAGCATGCATCTCAATGCCGCTCAACTAAAACTCAACCGTGCTCTTATCCAAACTGTCTTCAAATTAAAAAGCTGTTCTCTCATGCCAGTAGGTGCACTGTTCGAGTTTCTGGAGGTTGTCCATATTGTAAGAAGGCATGGCTGGGACTAACTGTTCACTCGAGGAATTGTAGAGACACAGAATGTTGCATCCCTCGCTGCTTGGATTTGAAGAAGCATGCAGAATGGATAGCAATGCAATCTGAATCTCGGCGTAGAGCTGCAGTTGTGGAAAGCATCAGAGAACTCCGTGATCATTGA 4755 0.3994 MHAKGSSSFVPNLPQQRGFDLSQQYVRNQAGFCTDWRKPPEMRYKRYFIRNKISAILSSSIHCEQAKQSSDIATILEHRLFIHAASKEDYMNQETLVQRVQTQLNKMYRTKGIQQQVDSPITYTYKTVPSSGFLHAWSNGSLPEPAFQKVAAPVINAIDYCAVNTKNKYDLPKGGLFNTSIVHEPVLPPHCSSITACTDMDMDVLSNFSVSGGGCNPEASSKSIISYFPRQHANDLEMDLKKYSCLGTIQKNESMAFHSTMGPLQSESLNLMISQHVSRENLEGSNLLPALMQPYDLCDKASTSTVQYMLPPDKRLEMESAFGVSLMNNASSDQWTHKMALPYSSEAPFGNSEAMLPPAKRLKMESAFGVSLMNNASSEQWTHKMAQPYSSEAPPGNSEAMLPPDKILEMESAFGVSFMNNASSDQWTHKMAQPYSSEAPSGNSEAMLPPDKILEMESAFGVSFMNNASSGQWTHKMAQPYSSEALSELQQQSESPPIHSEVTECTAEQFTNPMLDSISIDEIKNSGIDDTFGQSFKRETIPSKGLEVDHISEEPDPKSHNMINSSNLEETVIKLNSSMHTLCKDTIAADIEDIQGKTGFNQAEINGEKKVIEPKADQEKETKTSNTAISEINGLTNCLINNSSSDQWTHKMAQPYASEALSELQQHSESPLSSIDSEVTECNVEQFTNSMFDSMSISEIKNSAIDDTFGQNFKNETVPSEGLEAGHISEEPDPKSHDVVDRSNLEETVIGSNSNKHTLCEDPIAADIEDIQIKTGSNHAGLNAKKEVSEPKVDQEKETKSSNTTVNIVSLTESFTSTQIMEHIKGLRKKFVQGISEEETGIAASTCQLCAMEKLFFSPVPIYCLCCGSRIKRNGNYYCKKAEEFDTQHCFCNLCYKNSRGGSITFNGLSVSKTLLDRKRNDEVLEEAWVECNKCKRWQHQICALYNKRRDLDRSAEYICPICRLKEIENGMHVPYPKTAIFGAKDLPRTMLSDHIEKRLFQRLMQERTDRAKAEGNKNFDEVLAAENLTVRVVLSVDKQLKVNKQFLDIFLEENYPAEFSYKSKVILLFQQIEGADVCLFGMYVQEFGSECGYPNQRCVYISYLDSVKYFRPESKTVKGEALRTFVYHEILIGYLDFCKKRGFTTCYIWACPPLKGEDYVLYCHPDTQKTPKKDKLRHWYHSMLRKAAEENIVVGLTNIYDHFFVPTEKCDSKVTAARLPYFDGDYWSGAAMDLARNIEQETGGEYEKVLKKLVTKRTLKSMGHVDPSKGTAKDILVMQKLGQNILPVKEDFIIIQLQHACVHCHKVIVSGKRWFCTECKKFQECERCHTADSHTSVSGEKHILCQVYMDDIPVDTRENGIILDNGLFENRNNFLSFCQKNYFQFDTLRRAKYSSMMILYHLKSPTMLTIGTICSICCKPNAFQQSWKCEICPEFTVCSACYKETGAKSHAHKLSQTNSTALCLSGNEESKQKSVLMQKLLEVLQHASQCRSTKTQPCSYPNCLQIKKLFSHASRCTVRVSGGCPYCKKAWLGLTVHSRNCRDTECCIPRCLDLKKHAEWIAMQSESRRRAAVVESIRELRDH. 1585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02429 1584 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 981 1408 IPR031162 GO:0004402
Seca10g02429 1584 PANTHER CBP/P300-RELATED 69 1579 IPR013178 GO:0004402|GO:0006355|GO:0016573
Seca10g02429 1584 MobiDBLite consensus disorder prediction 785 799 - -
Seca10g02429 1584 SUPERFAMILY RING/U-box 1277 1339 - -
Seca10g02429 1584 Gene3D TAZ domain 1467 1580 IPR035898 -
Seca10g02429 1584 SUPERFAMILY TAZ domain 1471 1556 IPR035898 -
Seca10g02429 1584 SMART PHD_3 889 964 IPR001965 -
Seca10g02429 1584 MobiDBLite consensus disorder prediction 726 740 - -
Seca10g02429 1584 SUPERFAMILY FYVE/PHD zinc finger 926 966 IPR011011 -
Seca10g02429 1584 Gene3D - 1410 1461 IPR043145 -
Seca10g02429 1584 MobiDBLite consensus disorder prediction 782 801 - -
Seca10g02429 1584 ProSiteProfiles Zinc finger ZZ-type profile. 1297 1353 IPR000433 GO:0008270
Seca10g02429 1584 MobiDBLite consensus disorder prediction 714 740 - -
Seca10g02429 1584 Pfam PHD-finger 926 964 IPR019787 -
Seca10g02429 1584 Pfam TAZ zinc finger 1478 1552 IPR000197 -
Seca10g02429 1584 SUPERFAMILY RING/U-box 1392 1454 - -
Seca10g02429 1584 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 922 967 IPR013083 -
Seca10g02429 1584 Pfam Histone acetylation protein 1025 1238 IPR013178 GO:0004402|GO:0006355|GO:0016573
Seca10g02429 1584 SMART TAZ_2 1472 1553 IPR000197 -
Seca10g02429 1584 ProSitePatterns Zinc finger ZZ-type signature. 1415 1442 IPR000433 GO:0008270
Seca10g02429 1584 ProSiteProfiles Zinc finger TAZ-type profile. 1471 1555 IPR000197 -
Seca10g02429 1584 SMART KAT11_2 1015 1309 IPR013178 GO:0004402|GO:0006355|GO:0016573
Seca10g02429 1584 CDD PHD_HAC_like 891 963 - -
Seca10g02429 1584 ProSiteProfiles Zinc finger PHD-type profile. 889 966 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02429 Seca-Chr10 29393983 29404754 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Seca10g02429 HAT_KAT11 1.4e-28 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02429 K04498 - aprc:113866525 1476.84