Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02427 ATGGTGATCGGGCTTGTTCTAATCAATGGTGAAGGGATGCTTGCGTACAAGACAATATCTGGAACTAAAAACTTCAAAAAAGCAGTTCATCTGGCATTACAGTTTATTTCTCTCATTTTGAGCTTAATTGGTGTCTGGGCTGCTTGGAAGTTTCACATTGACAAGGGCATTGACAATTTCTACAGCCTGCATTCATGGTTGGGCCTTGCATGCCTTTTCCTATTCTCCATCCAGTGGGGTGCTGGCTTTGCAACATTTTGGTATCCAGGAGGCTCAAGAAATAGTAGAGCTGCCTTGTTGCCATGGCATGTGTTCTTTGGGATATATATCTATGCCTTGGCTATAGCCACAGCTACTACTGGTATTCTAGAGAAGGCTACATTCCTTCAGACCAACAAGGTCATATCACGCTACTCCAGTGAAGCACTGATGGTTAATTCTCTGGGCATATTGATCGTTATTTTAGGTGGCTTTGTTATTCTTGGAATAGTTACGCCAGCTTATAATAAAGCTGATGACCTTAGAGGAAACGAGTAA 537 0.4227 MVIGLVLINGEGMLAYKTISGTKNFKKAVHLALQFISLILSLIGVWAAWKFHIDKGIDNFYSLHSWLGLACLFLFSIQWGAGFATFWYPGGSRNSRAALLPWHVFFGIYIYALAIATATTGILEKATFLQTNKVISRYSSEALMVNSLGILIVILGGFVILGIVTPAYNKADDLRGNE. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02427 178 SMART 561_7 1 122 IPR006593 -
Seca10g02427 178 Pfam Eukaryotic cytochrome b561 1 128 IPR006593 -
Seca10g02427 178 CDD Cyt_b561_ACYB-1_like 1 130 - -
Seca10g02427 178 Gene3D - 1 175 - -
Seca10g02427 178 ProSiteProfiles Cytochrome b561 domain profile. 1 164 IPR006593 -
Seca10g02427 178 PANTHER CYTOCHROME B561-RELATED 1 165 IPR043205 GO:0016491
Seca10g02427 178 FunFam Cytochrome b reductase 1 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02427 Seca-Chr10 29364003 29366863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02427 1 174 Chloroplast and Mitochondria Gene Families AT5G38630 74.713 3.18e-96 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02427 K08360 - gmx:100787570 306.605