Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02426 ATGGATCCTTCTCGGCGAACTCCCCGCGCCGTGATCGATCCCGTCCCCAAGTTCCGCCAAGTCGGGTTCTTCGCTCCCGGAGCCCCACCAGAGCGCTCTCAATCGGGTCCACCCGACCCGACTCACTCTGCCACTCCCGTCCCCGACATCTCTCCCTCCCTCTCGCCGGTGATGATCCCGCCGCCGCGCCACCTCTCTGACAACCTCCTCCTCCACTCTCGTCCCGCCGCATCAACTCTCCGTGCTGACTCCATTACCGTCGGCGGCAGCAACTACGACGCTCCAGTGTCACCAGCCCCGTCGTCTTCCTACTCCAGCAGGATCGCCGCCGTCGGTGATGGAAGCTTTTTTGCTGGCAGCGGTGGCAAGGGGAACGGTGCTGGAAAAGTGGCGGCGTCATCCTTTCCTCGCGGAGGATTCGACTTGACGGCGATGAAGGCGAGTATAGTTCCTGCCAGCGAATTGACCACTGTTTCCGTGGTGAATGATTCGCTTGGGATTCCCGAAAAAGAAAAGGCAAACAAAGGAGGAGGGTCAGCTGTGGAAGTCAAAGATCAACCTACTAGTTCAAAACAGCAGAAACCGAAAACCTCAAAAGCTGAAAGACGTGCTCTTCAAGAAGCTCAACGAGCAGCAAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGCAACTGCAACTTCAGTGAATGCAAAACCAGCTAAACCTGTAAAGCCTGCACAGAAAGTTGATAATGCAGCTGCAGCCCCTGAGAAGAAAGGGGGTGATTGTCCACCAGAAAAGGATAGAAAGAAAGATGCCCCTCAACCACGCATGCAGTATGATGACAAGAGTCGAGTGGAAAAAGCTAAACGCCGTTCTGTGGTGAAACAAACTGAAGCTAGGAGCAGAGTTGAGTTGTTCAGGCATTTACCACAATATGAACATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCCATCTTCACCCTGTGCATTCTGCTGTTTATAAGGTGGGTTTGCAGTATCTGTCCGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACAGTGTTCCACCTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATTAGTAGTTATGTGTCATTTCTTATTGAGTGTCGTCCTCTGTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAAAGTCGGATAGCCAAGCTACCTTTAGCCCTGTCCGAGTCAGAAGCAAAAAGTTCTCTCCAGTCAGATATTGAGCGTTTCATAAGTGAGAAGATTGTACTTGCCAGCAAGGTGATAGTCAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGGTCATCATCAGCAGTTGAAATGATTCTTTTGCATGCACATGAATTAGGAAAACAGTTTCGTGTTGTGGTAGTTGACTCGCGTCCAAAGCTTAGAGGGCAACTTTTACTTCGCAGGCTCGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTCACTCGAGTTTTTCTGGGTGCTTCATCAGTGTTGTCTAATGGAACAGTATATTCAAGAGTTGGGAGTGCATGTGTTGCAATGGTTGCTCATGAATTCCATGTACCTGTCATAGTATGTTGTGAAGCCTATAAATTTCATGAAAGGGTACAACTGGATTCAATATGCTCGAATGAACTTGGTGATCCAGATGTCATTTCAAATGTTATGGGTAGAGAGGATATCAACTACTTGGATGGTCGGGCCGATATTGAAAATCTGCAACTTTTAAATCTAATTTATGATGCAACACCTTCGGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTAAGTTCTGGAAGTTTAAACAGGAGTTATACATTTGCTGCTAAAACATGCCTGCATTTGATCCTGGGCCTAACTGGGCTTTAG 1980 0.4712 MDPSRRTPRAVIDPVPKFRQVGFFAPGAPPERSQSGPPDPTHSATPVPDISPSLSPVMIPPPRHLSDNLLLHSRPAASTLRADSITVGGSNYDAPVSPAPSSSYSSRIAAVGDGSFFAGSGGKGNGAGKVAASSFPRGGFDLTAMKASIVPASELTTVSVVNDSLGIPEKEKANKGGGSAVEVKDQPTSSKQQKPKTSKAERRALQEAQRAAKAAAKAEGNKASATATSVNAKPAKPVKPAQKVDNAAAAPEKKGGDCPPEKDRKKDAPQPRMQYDDKSRVEKAKRRSVVKQTEARSRVELFRHLPQYEHGSQLPDLEAKFFHLHPVHSAVYKVGLQYLSGDISGGNARCIAMLQAFQEAIKDYSVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLALSESEAKSSLQSDIERFISEKIVLASKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGSACVAMVAHEFHVPVIVCCEAYKFHERVQLDSICSNELGDPDVISNVMGREDINYLDGRADIENLQLLNLIYDATPSDYVSMIVTDYGMVSSGSLNRSYTFAAKTCLHLILGLTGL. 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02426 659 Gene3D - 439 642 IPR042529 -
Seca10g02426 659 MobiDBLite consensus disorder prediction 164 290 - -
Seca10g02426 659 MobiDBLite consensus disorder prediction 31 45 - -
Seca10g02426 659 Pfam Initiation factor 2 subunit family 343 633 IPR000649 GO:0044237
Seca10g02426 659 SUPERFAMILY NagB/RpiA/CoA transferase-like 326 638 IPR037171 -
Seca10g02426 659 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 51 639 - -
Seca10g02426 659 MobiDBLite consensus disorder prediction 1 66 - -
Seca10g02426 659 MobiDBLite consensus disorder prediction 255 290 - -
Seca10g02426 659 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02426 Seca-Chr10 29356645 29361164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02426 4 633 Eukaryotic Initiation Factors Gene Family AT5G38640 64.985 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02426 K03680 - gmx:100775998 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02426 10 29356645 29361164 Seca10g02426 10 29356645 29361164 ECH