Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02394 ATGGCTTTCTCAGCTTGCTCTGCTCTCCTTGCCAAGAAGAAGGTTCTCTTCATTATGGGTGCAACTGGCACAGGAAAAACCAAACTTTCCATTAAGCTAGGCACCCAATTCCCCTCTGAAATCATCAATTCTGACAAAATCCAAGTCTATAAGGGTCTTGACATTTTGGTCAACAAAATTTCAGAGGCTGAACGTTGTGGCATTCCCCATCACTTGCTAGACTTCATTGACAATCCTGAATCCAATTTCACTGTTGATGACTTTTGCAAGCAAGCACTCTCAGCCATTGATCTCATTCATGAAAATGGACACTTACCCATTATTAACCCCAAAAATGAATTTCGTTCCAAATATGATTGTTGCTTCATTTGGCTTCATGTGTCTCTGTCTGTGTTATTTCAATACTTAGACCAAAGGGTTGATGAAATGGTTGATGCAGGGCTTGTGGATGAAGTTAGAGAGGCTTTTGTCCCTGGAGCCAATTACTCCAATGGGATTAGAAGAGCCATTGGGGTCCAGAAAGAAGCATGTCATGATGAGGCTTATAAGGAAAAGATGCTTCAAGATGCCATTAAGAGGACTAAAGAAAGTACTCACAAGTTAGCTGAAACTCAACTTATGAAGATTTGTAGGCTGAATAATGAGCTTGGATGGGGAATGAACATGATTGATTCAACAGAGATATTTATGGCTGTTTTAAGAGGAGAAAAGTATATGAATTTGTATGAAGAGGTTGTATTCAAACCAAGCTTGAAGATTGTGAAAAGGTTTCTAGAGGGGACAACCCAAGACCTTGATACCAAAATGAAGAAGAAGATGCAAGTTCCGATGTTTTAG 837 0.3967 MAFSACSALLAKKKVLFIMGATGTGKTKLSIKLGTQFPSEIINSDKIQVYKGLDILVNKISEAERCGIPHHLLDFIDNPESNFTVDDFCKQALSAIDLIHENGHLPIINPKNEFRSKYDCCFIWLHVSLSVLFQYLDQRVDEMVDAGLVDEVREAFVPGANYSNGIRRAIGVQKEACHDEAYKEKMLQDAIKRTKESTHKLAETQLMKICRLNNELGWGMNMIDSTEIFMAVLRGEKYMNLYEEVVFKPSLKIVKRFLEGTTQDLDTKMKKKMQVPMF. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02394 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 158 IPR027417 -
Seca10g02394 278 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 12 258 IPR039657 -
Seca10g02394 278 Pfam IPP transferase 48 108 - -
Seca10g02394 278 Pfam IPP transferase 112 206 - -
Seca10g02394 278 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 129 220 - -
Seca10g02394 278 Gene3D - 12 258 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02394 Seca-Chr10 28806181 28807083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02394 116 263 C2H2 Transcription Factor Family AT2G27760 33.516 2.12e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02394 K10760 - gmx:121173984 365.925