Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02376 ATGAATGATGCTAGTGGGAAGGGTTCTTCTTGTTTGGCCATTACGGAGAAGAAGAATCAGAGGCCAGGTGGTTGCATTGGTATTTTCTTTCAGCTCTTTGATTGGAACCGTAGGCTCACTAAGAAGAGGCTCTTCTCCAAGAAACTTCTTCCTCCTGCTTCTTCAAAGAAGTTTAAAGGAGATGAGAAAATGCCAAATTCCAAGCTCCACCTGATTGCTAATGAGAACAATGGAGGCTTCCCAAGTGCCAAAAAAGGTGGGAATCGTGTTATGGAGGTAGAACAGAAGCATGAAATGCGAGTTCCTGGTCTGGTTGCTAGGTTGATGGGTCTAGAATCTATTCCAGCTTCACAAAGAGATAGGACCAAAAATTCATCCTTTTCTGATGGGGAGGAGAAGGATTCTTTGGATGATCATAGTAGTGAGGGTGATAAGCAAAGGGTGGATTTGGAAATGGGAGTTGCAAATGCAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACGGGGACATATGAGAGAAAGGCAGTGACAAGGTTTGGTGCTGAGGCAATGCAAATTAAAAGTGTTTTGTCACAAGTAAGAAAGTATAATCACCATCAGAATAAACTTGCTTCTCCTTTGAAGAGTCCAAGAATTACTTCCAGAAAGAGTGCATCTCGAAGCTCTAGATTAATAGAAGCAGCTACTAAGATCTTGGAACCTGGATTGCAGGCTACAAGCAGAACAAAATATTCTCTTACATCTTCCACTTCCATTTATCCTCCCAATAATGCCATTGTGACAGAAAGGGTGGGAACTAAGGCAGTAGATAAACAAAATCAATCCAGTTATGATGCTAGTAAAGCCAAGCCTTTGATGGGGCATGCCTCTTGCAAAAATTGTGGTAATTTGCTTGATGTTGTTGATTGCAGGCCAGAGGTTGAGATCAGCACACCTATTGTTTCAGATGTTTTCACTGCCTCCTCATTGGGATCAGCACAGGAAGGAAGGCCATTTGTCCCTTCTCATGAAAATGATGTAGTTCTTTTGAGAAGCCAGGACAAGATTATAACTCTTGTTCATGAAGATGGAGAAAATAATGCTCATTCTTGTAATGAATCCACTACCAGAAGAATGCCTGTACCTTCTAAATGGGATTCGTCACGCCAACCATGTGGTGCGCTAGAGGATGATGAGGCATCTTCTTTTGCCTTCAAACAGAAAAATCAAATACAAGAACGGGTGTTAAGGGGTGAAAAGATTTCACTTGGATCTAGAACAAGTAATATGCAAGAGAAGAGAGTATCATCAGCTGCAAGCACTGTGAGTGGGACTAAAGACTTTGTTGCTTTGAATAGAAGCCTAAGTGGTCGAACTAGGATGAGGTCTCCTACCAAGATGGATAGTTGCAAATTTGATCTTGAGAGAAAACCTCCTAATAGAAAGAATGATTCTTTATCTCGTGTAAGCACCTTAGAGAGAAAAAGAAGGACCCCAAATGTCTCACAAGTTGAAGCTACAACTTCTGTTAATTTGGTTACAATGAAACAGAGAAATGTTAGTTCTGATGCACAAGGGGGAAAAAGGAGGAGTTTTGATGCTTCTTCCCCAAACAAGTATAATGTCAAAAGTAAACGTGGTAGTCAGCTGAAAACAGAAAATGTCAGTGACAAAATGGTCAATGAGGTAGTTTCATTCACCCATAGTTCCCCATTTAAGCAAAAGATAGTAATACCAGGTGGAAAGGAAGAGACAAGCAGTGATAATGAGAATAAGATTTATTTGCAAAGACCTCCACCCTTGAGAGCAGATGCTTTAGGTGCCATTCTAGAACAGAAGTTGAAGGAATTGGCTACTGGTGGTCCACCTAAAAAACCAACTGCCGTGATTCTTCAAGAACTGATATCTGCTCTTAAGTCAGAGCATCTAACATGTTCTGCTGATCATATGTTAAATGACAAGGTTGGTTTCCATCATGAGGCAAATCATGTAAGATTGTTAGGAACCTCTTGCAATAGCAATCATCTCAGTCCTGGATCTGTTCTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAGGATCAGGGCATGGTTTTCACCCTGACTCTATGGATTCCTCGTATAATCAACAGGAGCAATTGAAACATGATACTGAACTTTCAGATTCTGCAACATCATTTAACAAAGGGGAGATAGGTTATGAGATACTGACTGAACTTGTCAACCAAATTCATAGGACATTGCAAAGTTTTAATTTTTTTGGGACAAGATTGACAGAAAACAAGCTCACCCATATAAAAGAAGTTATCTTAAATGCTGAATTGGTTCTCGGAAGTGCCACTGAGCACAATGAGGGTGGGGTGTCACAACTTCTCATTTCTTGCCACCTGCTTAATGAACTGGACACCATGGCAAGTGATGATGCTATGTGGAGAGATTTTAATGGCTTTGTGGGTTGTGAGGATTCTAAAGACAGAAACCAACTCAAGGGATTTCTATTTGATTGTGTAATAGAATATCTAGAATCAATTTGCTGCCAACATTATAACAGTGTATTTAAGGCATGGTCTGCATGGACAAAGCTACCTTTATGCATGAAAGCTGAAATGTTGGTTCAAGAAGTCAAGAGTGAGATTAAGAAGTGGGCATGCATGGTTGAGATGGTACCTGACCAAATAATAGAATGGGAGATGAGCCACTCCTTGGGGAAATGGACTGATTTTAATATTGAAGCATTTGAGGCTGGTGTTGATATAGATGGGGATGTACTTCAAATTTTGGTTGATGAAATTGTTGAAGACCTTGTAGATTCTAGGCAAGGCACCTTTTGA 2814 0.4044 MNDASGKGSSCLAITEKKNQRPGGCIGIFFQLFDWNRRLTKKRLFSKKLLPPASSKKFKGDEKMPNSKLHLIANENNGGFPSAKKGGNRVMEVEQKHEMRVPGLVARLMGLESIPASQRDRTKNSSFSDGEEKDSLDDHSSEGDKQRVDLEMGVANAKHDSRPQKLQKTGTYERKAVTRFGAEAMQIKSVLSQVRKYNHHQNKLASPLKSPRITSRKSASRSSRLIEAATKILEPGLQATSRTKYSLTSSTSIYPPNNAIVTERVGTKAVDKQNQSSYDASKAKPLMGHASCKNCGNLLDVVDCRPEVEISTPIVSDVFTASSLGSAQEGRPFVPSHENDVVLLRSQDKIITLVHEDGENNAHSCNESTTRRMPVPSKWDSSRQPCGALEDDEASSFAFKQKNQIQERVLRGEKISLGSRTSNMQEKRVSSAASTVSGTKDFVALNRSLSGRTRMRSPTKMDSCKFDLERKPPNRKNDSLSRVSTLERKRRTPNVSQVEATTSVNLVTMKQRNVSSDAQGGKRRSFDASSPNKYNVKSKRGSQLKTENVSDKMVNEVVSFTHSSPFKQKIVIPGGKEETSSDNENKIYLQRPPPLRADALGAILEQKLKELATGGPPKKPTAVILQELISALKSEHLTCSADHMLNDKVGFHHEANHVRLLGTSCNSNHLSPGSVLEASFSSSSLDEGSGHGFHPDSMDSSYNQQEQLKHDTELSDSATSFNKGEIGYEILTELVNQIHRTLQSFNFFGTRLTENKLTHIKEVILNAELVLGSATEHNEGGVSQLLISCHLLNELDTMASDDAMWRDFNGFVGCEDSKDRNQLKGFLFDCVIEYLESICCQHYNSVFKAWSAWTKLPLCMKAEMLVQEVKSEIKKWACMVEMVPDQIIEWEMSHSLGKWTDFNIEAFEAGVDIDGDVLQILVDEIVEDLVDSRQGTF. 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02376 937 MobiDBLite consensus disorder prediction 363 377 - -
Seca10g02376 937 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 11 928 - -
Seca10g02376 937 MobiDBLite consensus disorder prediction 112 145 - -
Seca10g02376 937 Pfam Domain of unknown function (DUF4378) 757 924 IPR025486 -
Seca10g02376 937 MobiDBLite consensus disorder prediction 696 716 - -
Seca10g02376 937 MobiDBLite consensus disorder prediction 681 716 - -
Seca10g02376 937 MobiDBLite consensus disorder prediction 451 547 - -
Seca10g02376 937 MobiDBLite consensus disorder prediction 362 386 - -
Seca10g02376 937 Pfam DUF761-associated sequence motif 94 120 IPR032795 -
Seca10g02376 937 MobiDBLite consensus disorder prediction 124 145 - -
Seca10g02376 937 MobiDBLite consensus disorder prediction 201 221 - -
Seca10g02376 937 MobiDBLite consensus disorder prediction 495 547 - -
Seca10g02376 937 MobiDBLite consensus disorder prediction 458 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02376 Seca-Chr10 28489722 28494278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02376 11 929 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 32.706 5.65e-98 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02376 - - gmx:100813026 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02376 10 28489722 28494278 Seca10g02376 10 28489722 28494278 ECH