Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02347 ATGGCTTCTTCTTTCACCTCCCTACTACTTGTGCTTCTCTTGGCCATTTTGTCTGGTCCACAATGTTTCTGTTTGGCTTCCCAAGAGTTCCAAGTGGGTGGCTCAAAAGGGTGGGTTGTCCCACCTGCCAATGACACCAACATCTACAATGAATGGGCTTCCCACAACAGGTTCCACATCGGTGACTCCATCCAGTTTAAGTACAAGAAGGACTCTGTTATGGAGGTTGGTGAGGTAGATTATAAGAACTGCAATGCCACTCATCCAACCTTCTTCTCCAACAATGGTAACACTGTGTTGAGGTTAGATCACTCAGGGACTTACTACTTCATCAGTGGTGCATCAGGACACTGCCAGAAGGGACAGAAGATGATTGTGAGGGTTATGGTTCCGGATGAGTCTCTTCCTCAGCATGCCAAGTCTTCAGGGTACCATGGTCCAATTGGGGTCTCCGAAATGCTCTTCCTGCAGTTTGTTTTAACATGTTTTGCTTCCTATGTTATTTGA 507 0.4635 MASSFTSLLLVLLLAILSGPQCFCLASQEFQVGGSKGWVVPPANDTNIYNEWASHNRFHIGDSIQFKYKKDSVMEVGEVDYKNCNATHPTFFSNNGNTVLRLDHSGTYYFISGASGHCQKGQKMIVRVMVPDESLPQHAKSSGYHGPIGVSEMLFLQFVLTCFASYVI. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02347 168 CDD OsENODL1_like 29 129 IPR041846 -
Seca10g02347 168 FunFam Early nodulin-like protein 1 27 133 - -
Seca10g02347 168 Pfam Plastocyanin-like domain 47 122 IPR003245 GO:0009055
Seca10g02347 168 Gene3D - 26 132 IPR008972 -
Seca10g02347 168 SUPERFAMILY Cupredoxins 28 129 IPR008972 -
Seca10g02347 168 PANTHER BLUE COPPER PROTEIN 26 131 IPR039391 GO:0009055
Seca10g02347 168 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02347 Seca-Chr10 28053112 28053880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02347 6 129 Phytocyanin Superfamily AT3G18590 49.600 3.58e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02347 - - gmx:100815728 252.292