Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02338 ATGCTTTGTTTTGACCACCATTCCAAGCTTGTTTCACAAATTCATGATGCCAATGAAGAAACAATCGATTCGGGTGACTATGATATTGATGATGATCACCATGTAATCAACTCTCTCCATGAATGTCGCACTTCAGAAGGGTACAAGAAGTTAGATGTTGATGCTGACCACATGAGGAGGAACATCATAGATTGGTTGATAGGCACACACTATGGATTAAAGCTTAGGCCAGAAACCCTTTATCTTTGTGTCAACATTCTTGATCGTTTTCTTTGCAAAACCAAGTTTGATAAATCAACTACAAAGAAGGAATTGGAGCTTGTGGCTGTTACCTCATTATTGTTGGCTTCAAAATATGAACAACAAAGGTCACTCTCTGTTTCTGCTTTGGAGTACATTACACAAAATTCTTGCTCACAAGATGACATACGTGGCATGGAAATTGTTATACTTTCAAAGCTTAATTGGGTTTTGACAGTTCCAACTCCTTATGTCTTTCTTCCTAGGTACATGAGGGCATGTCTTTTATATGATGATGACAAGATCATGGGGAACATGGTGTTTTTCTTATCTGAACTCAGCTTGACACACTATCCCATTATGAGTCACTACATGCCTTCTTTAATTGCAGCTTCTGCTGTGTATTGTGCCAGAATTATTGTTGGAAGGTTCCCTTTTTGGAACAAGAATCTGAAGAACTGTTCTGGGTATTCTAAGAAGAAGTTGAGTTCTTGTGCCAAGCTTATGCTGGAATTATGCAGGGAAACTTGTAGAGATGGGAACATGGAAGTTTTTAAGAAATTCTCTAGTCCAAATCATTTTAAGGTTGCATATTTTGCTCAGCAAAAACTCGCAACAATCATTCTGATCTTAAAATTCCTGTCAATATATAAGGGCCAACCCCATCTATTATGGCTAAGGCTTATGACCGGGTGGAGTGGTCTTTCCTAG 951 0.3849 MLCFDHHSKLVSQIHDANEETIDSGDYDIDDDHHVINSLHECRTSEGYKKLDVDADHMRRNIIDWLIGTHYGLKLRPETLYLCVNILDRFLCKTKFDKSTTKKELELVAVTSLLLASKYEQQRSLSVSALEYITQNSCSQDDIRGMEIVILSKLNWVLTVPTPYVFLPRYMRACLLYDDDKIMGNMVFFLSELSLTHYPIMSHYMPSLIAASAVYCARIIVGRFPFWNKNLKNCSGYSKKKLSSCAKLMLELCRETCRDGNMEVFKKFSSPNHFKVAYFAQQKLATIILILKFLSIYKGQPHLLWLRLMTGWSGLS. 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02338 316 Gene3D - 153 287 - -
Seca10g02338 316 SMART cyclin_7 165 251 IPR013763 -
Seca10g02338 316 SMART cyclin_7 64 152 IPR013763 -
Seca10g02338 316 SUPERFAMILY Cyclin-like 56 156 IPR036915 -
Seca10g02338 316 SUPERFAMILY Cyclin-like 160 282 IPR036915 -
Seca10g02338 316 ProSitePatterns Cyclins signature. 59 90 IPR006671 -
Seca10g02338 316 PANTHER CYCLINS 39 261 IPR039361 -
Seca10g02338 316 SMART Cyclin_C_2 161 282 IPR004367 -
Seca10g02338 316 Pfam Cyclin, C-terminal domain 161 280 IPR004367 -
Seca10g02338 316 Gene3D - 52 152 - -
Seca10g02338 316 FunFam G2/mitotic-specific cyclin 46 159 - -
Seca10g02338 316 Pfam Cyclin, N-terminal domain 52 158 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02338 Seca-Chr10 27986921 27987871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02338 56 277 Core Cell Cycle Gene Families AT2G26760 39.640 4.17e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02338 K21777 - cave:132164002 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02338 10 27986921 27987871 Seca10g02338 10 27986921 27987871 ECH