Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02333 ATGTCGAGCGTGGCCATTAAGCTCTACAGCGTGTTCTTCAAGTTTCTCTTGAAGCACCGTTTGCAGAACCGGATCCAAACCTCGCTCGATGAATCCGACCCGTTTGGCGTCACTTCCAGACCCGGCGAATCCGTCGCTGCTCCCAACCCTTCCTTCTCCGACGGCATCGCCACCAAGGACATCCACATGGACCCCTTCACCTCCCTCTCCATTCGAATTTTCCTCCCCGAATCCGCACTTGCCCCGCCCGAACCCGATTCCAAACCTCACCTTCCCAAACCTAAACGAAAACCCGAACCTGAACCTGATACGGCGTCGTCGCAGCACGCTTTGCGGCGCTACAGTTCTGGCCCTCCGGGTGTGTCGCCGAGGGAAGAGACGAGGAGGAAAAGCGTCGGCAGCGTGGAGGGTTTGAATTCGACGGCTGGTGCCGGGTACGGCGGGTACGCGCCGTCGATGGATAATCGCCGGAGGAAACTTCCGGTGATGGTGCAGTTTCATGGCGGAGGTTGGGTTAGCGGGAGCAATGATTCAGCCGCGAACGACTTCTTCTGCCGGCGGATCGCGAAGATCTGCGACGCTGTCGTCGTCGCCGTCGGGTACCGGCTCGCGCCGGAGAATCGGTACCCGGCGGCGTTCGAGGACGGGTTGAAGGTGCTGCATTGGCTGGCGAAACAGGCGAATTTGGCAGAGTGTAGTAAGTCGTTGGGGATCAAGAAATTCGATGGTCATCACAGGCATATTGTCGATTCTTTTGGAGCTTCTATGGTTGAGCCATGGTTGGCTGCTCATGGGAATCCATCAAGGTGTGTTCTTCTTGGAGTGAGTTGTGGTGCAAATATTGCAGACTACGTGGCTCGAAAAGCTGTAGAAGCAGGGAAACATCTGGACCCTATCAAGGTGGTGGCACAGGTCCTGATGTATCCATTTTTTGTTGGAAGTGTGCCCACTCGTTCTGAAATAAAGTTGGCAAACTCTTATTTTTACGACAAGGCTATGTGTATGCTAGCATGGAAACTATTCCTGCCTGAGGAAGAATTTAGCCTAGACCATCCAGCTGCTAATCCCCTAGTCCCAGGCCAGGGTCCTCCTTTAAAGCTGATGCCTCCAACTTTGACAGTTGTGGCAGAACATGACTGGATGAGGGACCGAGCCATTGCTTACTCAGAGGAGCTTAGGAAGGTGAATGTTGATGCACCTGTTCTTGAGTATAAGGATGCAGTCCATGAATTTGCAACACTTGACATTCTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATCGCCATCTGGGTCAAGAAGTATATTTCACTTCGAGGTCATGAATTCTCATATTGA 1344 0.532 MSSVAIKLYSVFFKFLLKHRLQNRIQTSLDESDPFGVTSRPGESVAAPNPSFSDGIATKDIHMDPFTSLSIRIFLPESALAPPEPDSKPHLPKPKRKPEPEPDTASSQHALRRYSSGPPGVSPREETRRKSVGSVEGLNSTAGAGYGGYAPSMDNRRRKLPVMVQFHGGGWVSGSNDSAANDFFCRRIAKICDAVVVAVGYRLAPENRYPAAFEDGLKVLHWLAKQANLAECSKSLGIKKFDGHHRHIVDSFGASMVEPWLAAHGNPSRCVLLGVSCGANIADYVARKAVEAGKHLDPIKVVAQVLMYPFFVGSVPTRSEIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLVPGQGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDILLKSPQAQVCAEDIAIWVKKYISLRGHEFSY. 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02333 447 Pfam alpha/beta hydrolase fold 163 412 IPR013094 GO:0016787
Seca10g02333 447 Gene3D alpha/beta hydrolase 36 440 IPR029058 -
Seca10g02333 447 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 163 179 IPR002168 GO:0016787
Seca10g02333 447 MobiDBLite consensus disorder prediction 30 58 - -
Seca10g02333 447 MobiDBLite consensus disorder prediction 88 103 - -
Seca10g02333 447 PANTHER ARYLACETAMIDE DEACETYLASE 53 412 - -
Seca10g02333 447 MobiDBLite consensus disorder prediction 79 139 - -
Seca10g02333 447 SUPERFAMILY alpha/beta-Hydrolases 154 438 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02333 Seca-Chr10 27949923 27953854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02333 1 447 Carbohydrate Esterase AT3G27320 71.957 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02333 - - cave:132180842 715.687