Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02315 ATGGCTGGAGGTGTTATCCAACAGTTACTGAGGAGAAAACTCCAATCTCATTCTCCGAGTTATTCTTTGTCATCCATTGTCACAAAGAAAGACGGTGCTGGCTCTACTGGCAGCAGCTCCTTAAGAGCCCTTGCGCTAATTGGAGCTGGTGTCTCTGGTTTATTGGGTTTTGCGACAACAGCATCAGCTGATGAAGCTGAGCATGGCCTGGCATGTCCAAGCTATCCATGGCCTCACAAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATCAACAAGTCTGTGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCTTATACGGAAGAAGAGGTAAAAGCGATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCTTTCCTGAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTATTACCAAAGCTCGTCACAATGGTCAAAACTATGTGTTTGCCCTTCTAACTGGTTATCGTGATCCCCCAGCTGGTGTTTCGGTAATTTCCTCTCTTAAACATTTTTTAAAAACTAAACTCTAA 663 0.4495 MAGGVIQQLLRRKLQSHSPSYSLSSIVTKKDGAGSTGSSSLRALALIGAGVSGLLGFATTASADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPEPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSVISSLKHFLKTKL. 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02315 220 Pfam Cytochrome C1 family 77 209 IPR002326 GO:0009055|GO:0020037
Seca10g02315 220 Gene3D - 66 215 IPR036909 GO:0009055|GO:0020037
Seca10g02315 220 PANTHER CYTOCHROME C1 32 211 IPR002326 GO:0009055|GO:0020037
Seca10g02315 220 PRINTS Cytochrome C1 signature 140 160 IPR002326 GO:0009055|GO:0020037
Seca10g02315 220 PRINTS Cytochrome C1 signature 173 197 IPR002326 GO:0009055|GO:0020037
Seca10g02315 220 PRINTS Cytochrome C1 signature 95 114 IPR002326 GO:0009055|GO:0020037
Seca10g02315 220 PRINTS Cytochrome C1 signature 75 94 IPR002326 GO:0009055|GO:0020037
Seca10g02315 220 SUPERFAMILY Cytochrome c 70 209 IPR036909 GO:0009055|GO:0020037
Seca10g02315 220 ProSiteProfiles Cytochrome c family profile. 89 213 IPR009056 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02315 Seca-Chr10 27735148 27744818 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02315 1 214 Chloroplast and Mitochondria Gene Families AT3G27240 79.907 3.10e-116 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02315 K00413 - gmx:100803087 382.104